PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060864.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 184aa    MW: 20445.2 Da    PI: 9.4031
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.88.7e-1877127252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     e+++s e l+++F+l+  dAA++L+ + ++LK +CR++ I+RWP+Rk +++
  XP_028060864.1  77 EDSLSREILEQHFHLTCLDAASKLNFSESTLKHRCRKLDISRWPSRKRNKV 127
                     7899*******************************************8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MMQHVRVTKS STNEKLDLRL DILQTTRSPP HPQARQNGGL IENGSNVISA CQSHNAVVFS  60
EIEDTREPSK IKSGKKEDSL SREILEQHFH LTCLDAASKL NFSESTLKHR CRKLDISRWP  120
SRKRNKVKLV DESIPSAGAN DPTLSTSPSL LPTVVVLDQP KPSSFELQRE KGKSLCSTTE  180
VGFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.13e-11Nin-like family protein