PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061059.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 227aa MW: 25989.1 Da PI: 8.6764

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	6.9e-31	139	197	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+ ed ++v++tYeg Hnhe XP_028061059.1 139 MDDGFRWRKYGKKMVKNSPNPRNYYRCSTQGCNVKKRVERDGEDSSYVITTYEGIHNHE 197 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MSNSTFLAAN FPQSKNANPY PHPHPHPHLD DQTSYSTTYV MDGYDHYHQD FAPSKYLPVL 60 LELDQPEEHA ISNFTTTASL SQHSTVLQER SSGSSFNSIN KVPRNPTHMQ VKCRSGLKRV 120 KMDVGCRIAF RTKSDIEIMD DGFRWRKYGK KMVKNSPNPR NYYRCSTQGC NVKKRVERDG 180 EDSSYVITTY EGIHNHESPS MVYCNQMPLS FPTTTAWTLQ PSHFSSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	4e-45	WRKY family protein