PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061077.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 195aa    MW: 22464.1 Da    PI: 4.6808
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS132.64.4e-412189183373
            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     +++++dl+ + ++v+ gEa+aV +   l ++ ++++ le     +++++++  P v+vv+e ea+ ++++F++r++eal +y ++fd++ea + +
  XP_028061077.1   2 VSNIDDLKEDVFEVEAGEAIAVYCPWFLRTMTSQPHRLEA----LMRVIRNRFPCVMVVTEIEANSDAPTFMDRIMEALFFYGSVFDCFEACIDP 92 
                     578999*9***********************988888888....*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      + +ri++E+++++ +i+++v  eg+er+ rh ++  W + + ++ + + +ls++   qakl+ rk++ +   +++ + ++l++gWk+ p+ svS
  XP_028061077.1  93 CNPNRITIEAMYMRYAIRSIVISEGEERTTRHMKVDAWTDLFARFKMVETELSSSCLYQAKLMARKFGcESCCTIDMNGKCLLIGWKGTPISSVS 187
                     ********************************************************************8888*********************** PP

            GRAS 372 aW 373
                     aW
  XP_028061077.1 188 AW 189
                     ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MVSNIDDLKE DVFEVEAGEA IAVYCPWFLR TMTSQPHRLE ALMRVIRNRF PCVMVVTEIE  60
ANSDAPTFMD RIMEALFFYG SVFDCFEACI DPCNPNRITI EAMYMRYAIR SIVISEGEER  120
TTRHMKVDAW TDLFARFKMV ETELSSSCLY QAKLMARKFG CESCCTIDMN GKCLLIGWKG  180
TPISSVSAWY FLQEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.19e-29GRAS family protein