PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061110.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 413aa MW: 46589.9 Da PI: 9.0604

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.4	4.2e-16	17	106	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv++p + + l+lp f+++ +g+k s + +l++ s +W vk k+s++ + + +GW +Fv +gL+ gDfvvF+++ + f +v XP_028061110.1 17 FFKVMVP--GFLT-KLSLPPAFCRKVSGEK--SEEAVLTS-SQGTWHVKT--GKCSKGlICFNEGWDKFVGHHGLNLGDFVVFEHKADLHF--NV 101 6677743..3333.499*******8885..44677666.6679*..999999999*********************8765555..99 PP EEE-S CS B3 95 kvfrk 99 +vf++ XP_028061110.1 102 SVFDS 106 99986 PP
2	B3	59.6	5.6e-19	320	403	15	94
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +++p kf++e ++++++s ltl+d+sg+ W vkl + ++ks ++++tkGW eF +n+Lk+gD+++F+l+++ +++++v+ XP_028061110.1 320 KVYIPVKFLKESDLSENGS--LTLRDPSGKPWPVKLHFsrsgfSGKSLQVYMTKGWYEFYTSNKLKDGDVCLFELNRTvTRGRPVM 403 579*******9998775..***********8877777777777************************99888888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MSSTDMEGKL LPISRHFFKV MVPGFLTKLS LPPAFCRKVS GEKSEEAVLT SSQGTWHVKT 60 GKCSKGLICF NEGWDKFVGH HGLNLGDFVV FEHKADLHFN VSVFDSSACV KEFPASDQVF 120 VPSISEREFP AKLGNDQRKR AHGDQVFDPS TCKKEISAKL DNDQIKRATG VQVPGKKEYP 180 AKLGNDQRKS TRGDQVFDPS TCENEIHAKL GNDQRKRPHC DQMFDPSTCE REFIAKLAND 240 QRRREPSDPA FDPSACEKEF PAKLGYDQRK RGPGDQINIH EHGKHIKRKS PLEEAATYIP 300 GGPHFITTMS YGHGTSHYPK VYIPVKFLKE SDLSENGSLT LRDPSGKPWP VKLHFSRSGF 360 SGKSLQVYMT KGWYEFYTSN KLKDGDVCLF ELNRTVTRGR PVMMDVRIFP LQT

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MSSTDMEGKL LPISRHFFKV MVPGFLTKLS LPPAFCRKVS GEKSEEAVLT SSQGTWHVKT  60
GKCSKGLICF NEGWDKFVGH HGLNLGDFVV FEHKADLHFN VSVFDSSACV KEFPASDQVF  120
VPSISEREFP AKLGNDQRKR AHGDQVFDPS TCKKEISAKL DNDQIKRATG VQVPGKKEYP  180
AKLGNDQRKS TRGDQVFDPS TCENEIHAKL GNDQRKRPHC DQMFDPSTCE REFIAKLAND  240
QRRREPSDPA FDPSACEKEF PAKLGYDQRK RGPGDQINIH EHGKHIKRKS PLEEAATYIP  300
GGPHFITTMS YGHGTSHYPK VYIPVKFLKE SDLSENGSLT LRDPSGKPWP VKLHFSRSGF  360
SGKSLQVYMT KGWYEFYTSN KLKDGDVCLF ELNRTVTRGR PVMMDVRIFP LQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31680.1	2e-15	B3 family protein