PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061242.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 476aa MW: 51991.9 Da PI: 7.07

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.4e-32	257	312	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_028061242.1 257 KARRCWSPELHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 312 68****************************************************97 PP
2	Myb_DNA-binding	42.1	2e-13	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_028061242.1 259 RRCWSPELHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 310 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MMASSSELSL DWKPHSYSML LKSFRDQTDQ TQKLEEFLAR LEEEKLKIDA FKRELPLCMQ 60 LLTNAMEASR QQLQTHLANQ VPPRPVLEEF IPLKLSNSEC SDKASNMSDK SNWMTSAQLW 120 SQASDVITKQ ELTVTSPRET EIGFSVGPNK LGLDNKLQRN NGGAFHPFSK ERNSCPSSTL 180 LALPDLALAS NEKEMEDKKC SEIDNGIACL RRENSGKPGT GMVEQGHGGG PQDSQTTAIN 240 STAAGSASTN TNQTHRKARR CWSPELHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND 300 EVKSHLQKYR LHTRRPSPSP QAAGTPPPQL VVLGGIWVPP EYATAAAAAH GGAPPTLYGA 360 HPTTHGSQHY CAPQMPQEFY SGPPASQPHH QLHQQHALHH QLHIYKASSQ SHSSPESDVR 420 GPGDRTESFG DRKSESSGGW KDDSGGENGG GGDRKGLATL QGEGEESNGS EITLKF

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MMASSSELSL DWKPHSYSML LKSFRDQTDQ TQKLEEFLAR LEEEKLKIDA FKRELPLCMQ  60
LLTNAMEASR QQLQTHLANQ VPPRPVLEEF IPLKLSNSEC SDKASNMSDK SNWMTSAQLW  120
SQASDVITKQ ELTVTSPRET EIGFSVGPNK LGLDNKLQRN NGGAFHPFSK ERNSCPSSTL  180
LALPDLALAS NEKEMEDKKC SEIDNGIACL RRENSGKPGT GMVEQGHGGG PQDSQTTAIN  240
STAAGSASTN TNQTHRKARR CWSPELHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND  300
EVKSHLQKYR LHTRRPSPSP QAAGTPPPQL VVLGGIWVPP EYATAAAAAH GGAPPTLYGA  360
HPTTHGSQHY CAPQMPQEFY SGPPASQPHH QLHQQHALHH QLHIYKASSQ SHSSPESDVR  420
GPGDRTESFG DRKSESSGGW KDDSGGENGG GGDRKGLATL QGEGEESNGS EITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-109	G2-like family protein