PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061338.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 578aa MW: 66136 Da PI: 8.776

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.4	1.9e-07	4	42	56	90
FAR1 56 aetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 a+tr+gCka+++++ + gk++vt+++ +HnHela XP_028061338.1 4 AVTRVGCKAQFRIRYDAdagkGGKYVVTHFVADHNHELA 42 579*********987667689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MSCAVTRVGC KAQFRIRYDA DAGKGGKYVV THFVADHNHE LAEQHCVMYL RSHRSLNSGD 60 KAQAMAMRNV GVKTSQIMDY MINQSGSYEN VGFIHMDLHN HIQAERRAEV EDGDAQGALV 120 YLCAKLDVDA RFFFKYDVCN DNKLQNLFWA DSKSRADYAK FGDVTYRTNA YKKPFVMLAG 180 VTSHFRTTIF VCVLLANETI ETYTWVLETF MEAMGNKAPV SVLTDGDKSM REAIRRVFPD 240 ARHRLCNWHL GKNVVSNVHI SGFAHAFKQC MDMETDETKF EHGWTTMVEN FGLQTNSWVL 300 ETYEKRHMWA EAYMRGHFFA GMKSTQCSEC MNAYFNPFLQ HKLKLYEFVR HYDRALARIR 360 WTRAARKDGQ QWPQPSIDRT ITQMARYGIL CSSYNEMCFY ASQSTEGFKE ARDACLPMTS 420 RMKELYERNL NGGNGDKGKH SFRRQFGVED PDIVKTKGNP GRASSNCRRP KKCGNCKCIG 480 HTKRTCPKVR FSRTVGTNSD ADTPHIADRE YNAESLPVRC KIGLVDPSTS HIKQRRLFFD 540 VSPYSKQPVG QYGCVEAAVW KNDSNTIAEV NQVDSTSY

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MSCAVTRVGC KAQFRIRYDA DAGKGGKYVV THFVADHNHE LAEQHCVMYL RSHRSLNSGD  60
KAQAMAMRNV GVKTSQIMDY MINQSGSYEN VGFIHMDLHN HIQAERRAEV EDGDAQGALV  120
YLCAKLDVDA RFFFKYDVCN DNKLQNLFWA DSKSRADYAK FGDVTYRTNA YKKPFVMLAG  180
VTSHFRTTIF VCVLLANETI ETYTWVLETF MEAMGNKAPV SVLTDGDKSM REAIRRVFPD  240
ARHRLCNWHL GKNVVSNVHI SGFAHAFKQC MDMETDETKF EHGWTTMVEN FGLQTNSWVL  300
ETYEKRHMWA EAYMRGHFFA GMKSTQCSEC MNAYFNPFLQ HKLKLYEFVR HYDRALARIR  360
WTRAARKDGQ QWPQPSIDRT ITQMARYGIL CSSYNEMCFY ASQSTEGFKE ARDACLPMTS  420
RMKELYERNL NGGNGDKGKH SFRRQFGVED PDIVKTKGNP GRASSNCRRP KKCGNCKCIG  480
HTKRTCPKVR FSRTVGTNSD ADTPHIADRE YNAESLPVRC KIGLVDPSTS HIKQRRLFFD  540
VSPYSKQPVG QYGCVEAAVW KNDSNTIAEV NQVDSTSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-70	FAR1 family protein