PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028061473.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 193aa    MW: 21977.4 Da    PI: 10.0911
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028061473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.96.6e-0837122888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++ GF +++++s +    +++ +  f C ++g+ + +kk      ++k  + + ++++gC  +l+ +k    + w v+     HnH+
  XP_028061473.1  37 RKNGFVIVIKTSDYG-GGHRTPRIFFACERSGQYKAHKKLegddsSKKIVKITGTKKCGCPFELRARKLMvADDWIVDVACVMHNHA 122
                     788*******99998.555688999********99998887877666667788889999999999988878***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MDSMKDASDN FDLQQWSKEE VFKSKEELLG WVRNVGRKNG FVIVIKTSDY GGGHRTPRIF  60
FACERSGQYK AHKKLEGDDS SKKIVKITGT KKCGCPFELR ARKLMVADDW IVDVACVMHN  120
HAPAKHFEGH SFAGRLSEEE TSLLVDMSKS MVRPKEILVT LKRKDALNVT TMKTIYSVRH  180
RNNVIEKAGR SQM