PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061797.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 594aa MW: 66609.3 Da PI: 6.5101

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.4	8.6e-25	202	255	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_028061797.1 202 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 255 68*****************.9*****************************8 PP
2	Myb_DNA-binding	39.9	9.9e-13	204	254	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_028061797.1 204 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 254 678***********************************************7 PP
3	Response_reg	79.3	1.3e-26	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_028061797.1 22 VLVVDDDLAWLRILEKMLKKCSY-EVTTCCLAREALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMRGVQHG 114 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_028061797.1 115 ACDYLLKPIRMKELRN 130 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
METCFSSSSS SRIDAFPAGL RVLVVDDDLA WLRILEKMLK KCSYEVTTCC LAREALDLLR 60 ERKDGFDIVI SDVNMPDMDG FKLLEHVGLE MDLPVIMMSV DGETSRVMRG VQHGACDYLL 120 KPIRMKELRN IWQHVFRKRI HEVRDIEGHE GYEETQMMRH GSDQSDDGQL FGGGDLTSGK 180 KRKDAENRHD DRDCVDPSSV KKARVVWTVD LHQKFVKAVN QIGFDKVGPK KILDLMNVPW 240 LTRENVASHL QKYRLYLSRL QKENELKASF GGVKQSDSSS RDTAASLGLQ NSINRQQSDA 300 ASGIYGISSN KTLVQNVDPK IHEGDLKGIV SLPMAEPKKG PVHDIPNLPK TSGSKMGLNH 360 SFGSLEPDVK YTMYDSTVPK QYSWSEVSEI QFKQEHKPRH QLGNGFNRLS LPGLQHHVQV 420 DCLQPAPSVS PRPFNKESKK PACIEMKTSH ANCRSPQIRQ VAPIGSATNL CPVQSESHLA 480 SFHASEPILS TASSMKNNGL SQIFTNDLEP NQRNLVLGRS VGFASSDEDF LTCLLPGDRY 540 TTNVGLEDNE SFNHNCTELF AETPAFLYDA QRFEYEYSSE SVEYPVIDQG LFIV

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

METCFSSSSS SRIDAFPAGL RVLVVDDDLA WLRILEKMLK KCSYEVTTCC LAREALDLLR  60
ERKDGFDIVI SDVNMPDMDG FKLLEHVGLE MDLPVIMMSV DGETSRVMRG VQHGACDYLL  120
KPIRMKELRN IWQHVFRKRI HEVRDIEGHE GYEETQMMRH GSDQSDDGQL FGGGDLTSGK  180
KRKDAENRHD DRDCVDPSSV KKARVVWTVD LHQKFVKAVN QIGFDKVGPK KILDLMNVPW  240
LTRENVASHL QKYRLYLSRL QKENELKASF GGVKQSDSSS RDTAASLGLQ NSINRQQSDA  300
ASGIYGISSN KTLVQNVDPK IHEGDLKGIV SLPMAEPKKG PVHDIPNLPK TSGSKMGLNH  360
SFGSLEPDVK YTMYDSTVPK QYSWSEVSEI QFKQEHKPRH QLGNGFNRLS LPGLQHHVQV  420
DCLQPAPSVS PRPFNKESKK PACIEMKTSH ANCRSPQIRQ VAPIGSATNL CPVQSESHLA  480
SFHASEPILS TASSMKNNGL SQIFTNDLEP NQRNLVLGRS VGFASSDEDF LTCLLPGDRY  540
TTNVGLEDNE SFNHNCTELF AETPAFLYDA QRFEYEYSSE SVEYPVIDQG LFIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-122	ARR-B family protein