PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062069.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 185aa MW: 20597.6 Da PI: 6.0279

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.8	8e-32	116	174	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver+++dp++v++tYeg Hnh+ XP_028062069.1 116 LDDGFKWRKYGKKMVKNSPNPRNYYRCSAEGCPVKKRVERDRDDPRYVITTYEGVHNHQ 174 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MDSPESDSDY AATAAAANQS NFELSDFFEF DEEWAEGDHP PPPTPMVVSG YPQMNPVYAA 60 GSAASHGIND AARGSSSHLS IYEGTSIRDS GRSCGREKKE VKEKVAFKTQ SEIEILDDGF 120 KWRKYGKKMV KNSPNPRNYY RCSAEGCPVK KRVERDRDDP RYVITTYEGV HNHQGPSSTT 180 ITTKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	1e-42	WRKY family protein