PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062115.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 752aa MW: 86583.7 Da PI: 6.9336

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.9	5.3e-26	29	114	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnH+l p XP_028062115.1 29 YYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGKWYIHSFVKEHNHDLLP 114 8*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MDSNVITGNI NLEPQDDMEF ESNEAAYAYY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRPNGKWY IHSFVKEHNH DLLPAQAHLF 120 RSHRNVDLLN NDSKIRRKKI LAAVSKQYSA YQYTGSLENY IRNQHDKGRN LTLEEGDAQV 180 LLELFVHMQE ENPKFFYAVD LNEEHRLRNV FWVDAKGMDD YTNFGDVVSF DTTYVTNKYK 240 IPLVLFVGVN HHIQPTLLGC ALIADETVYT YVWLLQTWCL SMGGRAPRVI LTDQNNALKA 300 AVAAVLPDSR HCFSLWHVVE KIPQQLNYLC PWHDTFMEKF NKCILRSWTE EQFEKRWWKL 360 LDGFNLREGE WMQSLYEDRK LWVPTFMRDI SFAGLSTASR SESLSSFFDK YVHGETNLRG 420 FIERYKVILE DRYEEEAKAD FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA 480 ACHLNKEKED EATITYAVTD LEDNQDFIVE WNESKSNICC SCRLFEYNGY LCRHAIVVLQ 540 MSGVFSIPFK YILQRWTNAA TSRHAISERL DDIQCKVRHY NDLCRRAIIL GEEGSLSQES 600 YNIALGAIKE ALKQCASVNN STENDLRLST SVPLAIHGSE EDNQGSATCK EQTPNLKMTK 660 SNKASKRVEA GKEKANDENK RKKVSFELDN VDNVGTQGGF HQMELSSLRP TQLHDLVPAH 720 LHNVVPTMFH NVASTQFHNV ASTHVHDSRL PH

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MDSNVITGNI NLEPQDDMEF ESNEAAYAYY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRPNGKWY IHSFVKEHNH DLLPAQAHLF  120
RSHRNVDLLN NDSKIRRKKI LAAVSKQYSA YQYTGSLENY IRNQHDKGRN LTLEEGDAQV  180
LLELFVHMQE ENPKFFYAVD LNEEHRLRNV FWVDAKGMDD YTNFGDVVSF DTTYVTNKYK  240
IPLVLFVGVN HHIQPTLLGC ALIADETVYT YVWLLQTWCL SMGGRAPRVI LTDQNNALKA  300
AVAAVLPDSR HCFSLWHVVE KIPQQLNYLC PWHDTFMEKF NKCILRSWTE EQFEKRWWKL  360
LDGFNLREGE WMQSLYEDRK LWVPTFMRDI SFAGLSTASR SESLSSFFDK YVHGETNLRG  420
FIERYKVILE DRYEEEAKAD FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA  480
ACHLNKEKED EATITYAVTD LEDNQDFIVE WNESKSNICC SCRLFEYNGY LCRHAIVVLQ  540
MSGVFSIPFK YILQRWTNAA TSRHAISERL DDIQCKVRHY NDLCRRAIIL GEEGSLSQES  600
YNIALGAIKE ALKQCASVNN STENDLRLST SVPLAIHGSE EDNQGSATCK EQTPNLKMTK  660
SNKASKRVEA GKEKANDENK RKKVSFELDN VDNVGTQGGF HQMELSSLRP TQLHDLVPAH  720
LHNVVPTMFH NVASTQFHNV ASTHVHDSRL PH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	0.0	FAR1 family protein