PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062326.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 417aa MW: 48082.2 Da PI: 5.7841

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.4	1.2e-23	66	156	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs++k + +k+k+++eit+rtfvC+keg+r +k++ + +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028062326.1 66 DFYNTYGGKVGFSIKKLYAHKNKHTKEITSRTFVCYKEGTRGIDKRD-PLVKFPRQEVRCGCRARFSIKLDRnLGKYVAIDFVEHHNHDLVP 156 6*****************************************999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MVDGGDGNGE RMAEGRESGC DATMADGRES GCDEVIEENN VVNELANCGW KPKLGMSFDS 60 EQAAYDFYNT YGGKVGFSIK KLYAHKNKHT KEITSRTFVC YKEGTRGIDK RDPLVKFPRQ 120 EVRCGCRARF SIKLDRNLGK YVAIDFVEHH NHDLVPQECI HMLPSQRKIS TTQAIEVELA 180 AESGIPLRSA YELFGRESGG RASLGFTKLD QKNYLRSKRQ KDLEYGEAGS VLQYFRKKSL 240 ENPSFYYAVQ LDCEEQISNI FWADAQMIMD YAQFGDVVTF DTTYKLNNEH RPFETFVGFN 300 HHRETVVFGA ALMHDETAES FTWLFQIFLE DYLNCDHNLM EFFKHFERVL YDKRYKELEA 360 EYNLCQKLPR VAIPTVMLKQ MADIYTKTIF EEFQNEYVQS IEASIVGTIH DVARSLK

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MVDGGDGNGE RMAEGRESGC DATMADGRES GCDEVIEENN VVNELANCGW KPKLGMSFDS  60
EQAAYDFYNT YGGKVGFSIK KLYAHKNKHT KEITSRTFVC YKEGTRGIDK RDPLVKFPRQ  120
EVRCGCRARF SIKLDRNLGK YVAIDFVEHH NHDLVPQECI HMLPSQRKIS TTQAIEVELA  180
AESGIPLRSA YELFGRESGG RASLGFTKLD QKNYLRSKRQ KDLEYGEAGS VLQYFRKKSL  240
ENPSFYYAVQ LDCEEQISNI FWADAQMIMD YAQFGDVVTF DTTYKLNNEH RPFETFVGFN  300
HHRETVVFGA ALMHDETAES FTWLFQIFLE DYLNCDHNLM EFFKHFERVL YDKRYKELEA  360
EYNLCQKLPR VAIPTVMLKQ MADIYTKTIF EEFQNEYVQS IEASIVGTIH DVARSLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-68	FAR1 family protein