PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028062416.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 232aa    MW: 26209.4 Da    PI: 10.6105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028062416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.8e-11109150351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ e Aa+++++a+ 
  XP_028062416.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEAAARLYDRAAF 150
                     79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MVSIRRRKLL GLCSGRSSFF SPLPRFSDNG NASGNPTQNA KPVSVHPMPS VDGEQPKEKT  60
ISKVSPGSSN ASGSSSSKEQ HNQQYPVPEV KRRKRHRRKH FENQEPCLMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSQEA AARLYDRAAF MCGREPNFEL SEEEKQELRK FKWDEFLAMT  180
RSAITNKRHR RRTGAGARRK SEPSTQNSDW EGEQGVNGFS ASEDVEPETS LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-45ERF family protein