PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062427.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 195aa MW: 22724.7 Da PI: 8.5965

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.2	9.4e-21	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_028062427.1 7 SRWCPTPEQLMILEEMYRGgLRTPNATQIQQITAHLsyygKIEGKNVFYWFQNHKARDRQ 66 7***************99***********************************996 PP
2	Wus_type_Homeobox	120.5	7e-39	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++iLee+y+ GlrtPn+ +iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk XP_028062427.1 6 SSRWCPTPEQLMILEEMYRGGLRTPNATQIQQITAHLSYYGKIEGKNVFYWFQNHKARDRQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MSPTGSSRWC PTPEQLMILE EMYRGGLRTP NATQIQQITA HLSYYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLSRQLMIQQ QQQQFQQNHF LPQFPNCTTT PVWFLPQGGV EDVSRPMVSH 120 SWNVDYHHPA ERCEADKSTT RTYSRDWMMM MDHEGPTSPC CNRPLKTLEL FPITATSLKD 180 ECTTSNHIPS STSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	2e-36	WOX family protein