PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062723.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 887aa MW: 101990 Da PI: 6.6851

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062723.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.6	1.6e-31	180	272	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062723.1 180 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 272 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 887 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSIFR MEFEPLGIGN DVIEFDMMGL 120 GENPVEIHHP IDGDDDDRFL ENSYGSGGGG AAELYIPEGD TNLEPYEGME FESEEAAKAF 180 YNSYARRVGF STRVSMSRRS RRDGAIIQRS FVCAKEGFRV EKEKPRRDTA KVKRPRAETR 240 VGCKAMLVVK IQDSGRWVVS GFVKEHNHEL VPPDKVHCLR SHRHVSGSAK SLIDTLQGAG 300 IGPSGIMSAL IREYGGISNV GFTERDCRNY MRSSRQRTLG GDTQLLLDYL RQKQSENPAF 360 FYAVQGDEDQ CMSNIFWADP KARANYTYFG DTVTFDTTYR SNRYRLPFAP FTGVNHHGHP 420 VLFGSALLIN ESEASFVWLF RTWLEAMSGR PPVSITTDHD RVIRLAITEV FPETRHRFCK 480 WHIFKECQEK LSHVLIEHPN FEVELHKYVD MSESIEEFES CWLSLIDRYD LQEHEWLQTI 540 YADRWQWVPV YLRDTFFAEM SITQRSDSMN SYFDGYVNAS TTLQLFVKQY EKALESRYEK 600 EVKADYDTMN TAPILKTPSP MEKQAAEAYT RKLFIKFQEE LVETLTFLAT KVEEEEATTT 660 YRVAKFGENH KAYFVKSDVR EMKASCSCQM FEFSGLLCRH TLTVFRVTNV LTLPSHYILK 720 RWTRNAKSGV MLEERSSDLL NGSQESPTVR YNNLRCEALK FVDEGVKTIE IFNVATDALK 780 EAANKVAFAK KNDGRVTSVN GTSREDCLTH RNHANDTCGA HQWGSEQPQS EDEQDRKIQK 840 LTQQLERARR KCGLYRANLL SVLKDIEQQK LQLTVKVQSI KLGMKDQ

Sequence ? help Back to Top

Protein Sequence Length: 887 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSIFR MEFEPLGIGN DVIEFDMMGL  120
GENPVEIHHP IDGDDDDRFL ENSYGSGGGG AAELYIPEGD TNLEPYEGME FESEEAAKAF  180
YNSYARRVGF STRVSMSRRS RRDGAIIQRS FVCAKEGFRV EKEKPRRDTA KVKRPRAETR  240
VGCKAMLVVK IQDSGRWVVS GFVKEHNHEL VPPDKVHCLR SHRHVSGSAK SLIDTLQGAG  300
IGPSGIMSAL IREYGGISNV GFTERDCRNY MRSSRQRTLG GDTQLLLDYL RQKQSENPAF  360
FYAVQGDEDQ CMSNIFWADP KARANYTYFG DTVTFDTTYR SNRYRLPFAP FTGVNHHGHP  420
VLFGSALLIN ESEASFVWLF RTWLEAMSGR PPVSITTDHD RVIRLAITEV FPETRHRFCK  480
WHIFKECQEK LSHVLIEHPN FEVELHKYVD MSESIEEFES CWLSLIDRYD LQEHEWLQTI  540
YADRWQWVPV YLRDTFFAEM SITQRSDSMN SYFDGYVNAS TTLQLFVKQY EKALESRYEK  600
EVKADYDTMN TAPILKTPSP MEKQAAEAYT RKLFIKFQEE LVETLTFLAT KVEEEEATTT  660
YRVAKFGENH KAYFVKSDVR EMKASCSCQM FEFSGLLCRH TLTVFRVTNV LTLPSHYILK  720
RWTRNAKSGV MLEERSSDLL NGSQESPTVR YNNLRCEALK FVDEGVKTIE IFNVATDALK  780
EAANKVAFAK KNDGRVTSVN GTSREDCLTH RNHANDTCGA HQWGSEQPQS EDEQDRKIQK  840
LTQQLERARR KCGLYRANLL SVLKDIEQQK LQLTVKVQSI KLGMKDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein