PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062724.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 885aa MW: 101705 Da PI: 6.6263

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.6	1.6e-31	178	270	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062724.1 178 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 270 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 885 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSMME FEPLGIGNDV IEFDMMGLGE 120 NPVEIHHPID GDDDDRFLEN SYGSGGGGAA ELYIPEGDTN LEPYEGMEFE SEEAAKAFYN 180 SYARRVGFST RVSMSRRSRR DGAIIQRSFV CAKEGFRVEK EKPRRDTAKV KRPRAETRVG 240 CKAMLVVKIQ DSGRWVVSGF VKEHNHELVP PDKVHCLRSH RHVSGSAKSL IDTLQGAGIG 300 PSGIMSALIR EYGGISNVGF TERDCRNYMR SSRQRTLGGD TQLLLDYLRQ KQSENPAFFY 360 AVQGDEDQCM SNIFWADPKA RANYTYFGDT VTFDTTYRSN RYRLPFAPFT GVNHHGHPVL 420 FGSALLINES EASFVWLFRT WLEAMSGRPP VSITTDHDRV IRLAITEVFP ETRHRFCKWH 480 IFKECQEKLS HVLIEHPNFE VELHKYVDMS ESIEEFESCW LSLIDRYDLQ EHEWLQTIYA 540 DRWQWVPVYL RDTFFAEMSI TQRSDSMNSY FDGYVNASTT LQLFVKQYEK ALESRYEKEV 600 KADYDTMNTA PILKTPSPME KQAAEAYTRK LFIKFQEELV ETLTFLATKV EEEEATTTYR 660 VAKFGENHKA YFVKSDVREM KASCSCQMFE FSGLLCRHTL TVFRVTNVLT LPSHYILKRW 720 TRNAKSGVML EERSSDLLNG SQESPTVRYN NLRCEALKFV DEGVKTIEIF NVATDALKEA 780 ANKVAFAKKN DGRVTSVNGT SREDCLTHRN HANDTCGAHQ WGSEQPQSED EQDRKIQKLT 840 QQLERARRKC GLYRANLLSV LKDIEQQKLQ LTVKVQSIKL GMKDQ

Sequence ? help Back to Top

Protein Sequence Length: 885 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSMME FEPLGIGNDV IEFDMMGLGE  120
NPVEIHHPID GDDDDRFLEN SYGSGGGGAA ELYIPEGDTN LEPYEGMEFE SEEAAKAFYN  180
SYARRVGFST RVSMSRRSRR DGAIIQRSFV CAKEGFRVEK EKPRRDTAKV KRPRAETRVG  240
CKAMLVVKIQ DSGRWVVSGF VKEHNHELVP PDKVHCLRSH RHVSGSAKSL IDTLQGAGIG  300
PSGIMSALIR EYGGISNVGF TERDCRNYMR SSRQRTLGGD TQLLLDYLRQ KQSENPAFFY  360
AVQGDEDQCM SNIFWADPKA RANYTYFGDT VTFDTTYRSN RYRLPFAPFT GVNHHGHPVL  420
FGSALLINES EASFVWLFRT WLEAMSGRPP VSITTDHDRV IRLAITEVFP ETRHRFCKWH  480
IFKECQEKLS HVLIEHPNFE VELHKYVDMS ESIEEFESCW LSLIDRYDLQ EHEWLQTIYA  540
DRWQWVPVYL RDTFFAEMSI TQRSDSMNSY FDGYVNASTT LQLFVKQYEK ALESRYEKEV  600
KADYDTMNTA PILKTPSPME KQAAEAYTRK LFIKFQEELV ETLTFLATKV EEEEATTTYR  660
VAKFGENHKA YFVKSDVREM KASCSCQMFE FSGLLCRHTL TVFRVTNVLT LPSHYILKRW  720
TRNAKSGVML EERSSDLLNG SQESPTVRYN NLRCEALKFV DEGVKTIEIF NVATDALKEA  780
ANKVAFAKKN DGRVTSVNGT SREDCLTHRN HANDTCGAHQ WGSEQPQSED EQDRKIQKLT  840
QQLERARRKC GLYRANLLSV LKDIEQQKLQ LTVKVQSIKL GMKDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein