PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062725.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 872aa MW: 100310 Da PI: 6.687

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.6	1.6e-31	165	257	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062725.1 165 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 257 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRFRMEFEP LGIGNDVIEF DMMGLGENPV EIHHPIDGDD 120 DDRFLENSYG SGGGGAAELY IPEGDTNLEP YEGMEFESEE AAKAFYNSYA RRVGFSTRVS 180 MSRRSRRDGA IIQRSFVCAK EGFRVEKEKP RRDTAKVKRP RAETRVGCKA MLVVKIQDSG 240 RWVVSGFVKE HNHELVPPDK VHCLRSHRHV SGSAKSLIDT LQGAGIGPSG IMSALIREYG 300 GISNVGFTER DCRNYMRSSR QRTLGGDTQL LLDYLRQKQS ENPAFFYAVQ GDEDQCMSNI 360 FWADPKARAN YTYFGDTVTF DTTYRSNRYR LPFAPFTGVN HHGHPVLFGS ALLINESEAS 420 FVWLFRTWLE AMSGRPPVSI TTDHDRVIRL AITEVFPETR HRFCKWHIFK ECQEKLSHVL 480 IEHPNFEVEL HKYVDMSESI EEFESCWLSL IDRYDLQEHE WLQTIYADRW QWVPVYLRDT 540 FFAEMSITQR SDSMNSYFDG YVNASTTLQL FVKQYEKALE SRYEKEVKAD YDTMNTAPIL 600 KTPSPMEKQA AEAYTRKLFI KFQEELVETL TFLATKVEEE EATTTYRVAK FGENHKAYFV 660 KSDVREMKAS CSCQMFEFSG LLCRHTLTVF RVTNVLTLPS HYILKRWTRN AKSGVMLEER 720 SSDLLNGSQE SPTVRYNNLR CEALKFVDEG VKTIEIFNVA TDALKEAANK VAFAKKNDGR 780 VTSVNGTSRE DCLTHRNHAN DTCGAHQWGS EQPQSEDEQD RKIQKLTQQL ERARRKCGLY 840 RANLLSVLKD IEQQKLQLTV KVQSIKLGMK DQ

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRFRMEFEP LGIGNDVIEF DMMGLGENPV EIHHPIDGDD  120
DDRFLENSYG SGGGGAAELY IPEGDTNLEP YEGMEFESEE AAKAFYNSYA RRVGFSTRVS  180
MSRRSRRDGA IIQRSFVCAK EGFRVEKEKP RRDTAKVKRP RAETRVGCKA MLVVKIQDSG  240
RWVVSGFVKE HNHELVPPDK VHCLRSHRHV SGSAKSLIDT LQGAGIGPSG IMSALIREYG  300
GISNVGFTER DCRNYMRSSR QRTLGGDTQL LLDYLRQKQS ENPAFFYAVQ GDEDQCMSNI  360
FWADPKARAN YTYFGDTVTF DTTYRSNRYR LPFAPFTGVN HHGHPVLFGS ALLINESEAS  420
FVWLFRTWLE AMSGRPPVSI TTDHDRVIRL AITEVFPETR HRFCKWHIFK ECQEKLSHVL  480
IEHPNFEVEL HKYVDMSESI EEFESCWLSL IDRYDLQEHE WLQTIYADRW QWVPVYLRDT  540
FFAEMSITQR SDSMNSYFDG YVNASTTLQL FVKQYEKALE SRYEKEVKAD YDTMNTAPIL  600
KTPSPMEKQA AEAYTRKLFI KFQEELVETL TFLATKVEEE EATTTYRVAK FGENHKAYFV  660
KSDVREMKAS CSCQMFEFSG LLCRHTLTVF RVTNVLTLPS HYILKRWTRN AKSGVMLEER  720
SSDLLNGSQE SPTVRYNNLR CEALKFVDEG VKTIEIFNVA TDALKEAANK VAFAKKNDGR  780
VTSVNGTSRE DCLTHRNHAN DTCGAHQWGS EQPQSEDEQD RKIQKLTQQL ERARRKCGLY  840
RANLLSVLKD IEQQKLQLTV KVQSIKLGMK DQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein