PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062726.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 870aa MW: 100007 Da PI: 6.6278

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.6	1.6e-31	163	255	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062726.1 163 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 255 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRMEFEPLG IGNDVIEFDM MGLGENPVEI HHPIDGDDDD 120 RFLENSYGSG GGGAAELYIP EGDTNLEPYE GMEFESEEAA KAFYNSYARR VGFSTRVSMS 180 RRSRRDGAII QRSFVCAKEG FRVEKEKPRR DTAKVKRPRA ETRVGCKAML VVKIQDSGRW 240 VVSGFVKEHN HELVPPDKVH CLRSHRHVSG SAKSLIDTLQ GAGIGPSGIM SALIREYGGI 300 SNVGFTERDC RNYMRSSRQR TLGGDTQLLL DYLRQKQSEN PAFFYAVQGD EDQCMSNIFW 360 ADPKARANYT YFGDTVTFDT TYRSNRYRLP FAPFTGVNHH GHPVLFGSAL LINESEASFV 420 WLFRTWLEAM SGRPPVSITT DHDRVIRLAI TEVFPETRHR FCKWHIFKEC QEKLSHVLIE 480 HPNFEVELHK YVDMSESIEE FESCWLSLID RYDLQEHEWL QTIYADRWQW VPVYLRDTFF 540 AEMSITQRSD SMNSYFDGYV NASTTLQLFV KQYEKALESR YEKEVKADYD TMNTAPILKT 600 PSPMEKQAAE AYTRKLFIKF QEELVETLTF LATKVEEEEA TTTYRVAKFG ENHKAYFVKS 660 DVREMKASCS CQMFEFSGLL CRHTLTVFRV TNVLTLPSHY ILKRWTRNAK SGVMLEERSS 720 DLLNGSQESP TVRYNNLRCE ALKFVDEGVK TIEIFNVATD ALKEAANKVA FAKKNDGRVT 780 SVNGTSREDC LTHRNHANDT CGAHQWGSEQ PQSEDEQDRK IQKLTQQLER ARRKCGLYRA 840 NLLSVLKDIE QQKLQLTVKV QSIKLGMKDQ

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRMEFEPLG IGNDVIEFDM MGLGENPVEI HHPIDGDDDD  120
RFLENSYGSG GGGAAELYIP EGDTNLEPYE GMEFESEEAA KAFYNSYARR VGFSTRVSMS  180
RRSRRDGAII QRSFVCAKEG FRVEKEKPRR DTAKVKRPRA ETRVGCKAML VVKIQDSGRW  240
VVSGFVKEHN HELVPPDKVH CLRSHRHVSG SAKSLIDTLQ GAGIGPSGIM SALIREYGGI  300
SNVGFTERDC RNYMRSSRQR TLGGDTQLLL DYLRQKQSEN PAFFYAVQGD EDQCMSNIFW  360
ADPKARANYT YFGDTVTFDT TYRSNRYRLP FAPFTGVNHH GHPVLFGSAL LINESEASFV  420
WLFRTWLEAM SGRPPVSITT DHDRVIRLAI TEVFPETRHR FCKWHIFKEC QEKLSHVLIE  480
HPNFEVELHK YVDMSESIEE FESCWLSLID RYDLQEHEWL QTIYADRWQW VPVYLRDTFF  540
AEMSITQRSD SMNSYFDGYV NASTTLQLFV KQYEKALESR YEKEVKADYD TMNTAPILKT  600
PSPMEKQAAE AYTRKLFIKF QEELVETLTF LATKVEEEEA TTTYRVAKFG ENHKAYFVKS  660
DVREMKASCS CQMFEFSGLL CRHTLTVFRV TNVLTLPSHY ILKRWTRNAK SGVMLEERSS  720
DLLNGSQESP TVRYNNLRCE ALKFVDEGVK TIEIFNVATD ALKEAANKVA FAKKNDGRVT  780
SVNGTSREDC LTHRNHANDT CGAHQWGSEQ PQSEDEQDRK IQKLTQQLER ARRKCGLYRA  840
NLLSVLKDIE QQKLQLTVKV QSIKLGMKDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein