PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062727.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 839aa MW: 96537.3 Da PI: 7.5435

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.7	1.5e-31	132	224	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062727.1 132 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 224 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSIGG GGAAELYIPE GDTNLEPYEG 120 MEFESEEAAK AFYNSYARRV GFSTRVSMSR RSRRDGAIIQ RSFVCAKEGF RVEKEKPRRD 180 TAKVKRPRAE TRVGCKAMLV VKIQDSGRWV VSGFVKEHNH ELVPPDKVHC LRSHRHVSGS 240 AKSLIDTLQG AGIGPSGIMS ALIREYGGIS NVGFTERDCR NYMRSSRQRT LGGDTQLLLD 300 YLRQKQSENP AFFYAVQGDE DQCMSNIFWA DPKARANYTY FGDTVTFDTT YRSNRYRLPF 360 APFTGVNHHG HPVLFGSALL INESEASFVW LFRTWLEAMS GRPPVSITTD HDRVIRLAIT 420 EVFPETRHRF CKWHIFKECQ EKLSHVLIEH PNFEVELHKY VDMSESIEEF ESCWLSLIDR 480 YDLQEHEWLQ TIYADRWQWV PVYLRDTFFA EMSITQRSDS MNSYFDGYVN ASTTLQLFVK 540 QYEKALESRY EKEVKADYDT MNTAPILKTP SPMEKQAAEA YTRKLFIKFQ EELVETLTFL 600 ATKVEEEEAT TTYRVAKFGE NHKAYFVKSD VREMKASCSC QMFEFSGLLC RHTLTVFRVT 660 NVLTLPSHYI LKRWTRNAKS GVMLEERSSD LLNGSQESPT VRYNNLRCEA LKFVDEGVKT 720 IEIFNVATDA LKEAANKVAF AKKNDGRVTS VNGTSREDCL THRNHANDTC GAHQWGSEQP 780 QSEDEQDRKI QKLTQQLERA RRKCGLYRAN LLSVLKDIEQ QKLQLTVKVQ SIKLGMKDQ

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRSVSYSFQ LCTCFLSIGG GGAAELYIPE GDTNLEPYEG  120
MEFESEEAAK AFYNSYARRV GFSTRVSMSR RSRRDGAIIQ RSFVCAKEGF RVEKEKPRRD  180
TAKVKRPRAE TRVGCKAMLV VKIQDSGRWV VSGFVKEHNH ELVPPDKVHC LRSHRHVSGS  240
AKSLIDTLQG AGIGPSGIMS ALIREYGGIS NVGFTERDCR NYMRSSRQRT LGGDTQLLLD  300
YLRQKQSENP AFFYAVQGDE DQCMSNIFWA DPKARANYTY FGDTVTFDTT YRSNRYRLPF  360
APFTGVNHHG HPVLFGSALL INESEASFVW LFRTWLEAMS GRPPVSITTD HDRVIRLAIT  420
EVFPETRHRF CKWHIFKECQ EKLSHVLIEH PNFEVELHKY VDMSESIEEF ESCWLSLIDR  480
YDLQEHEWLQ TIYADRWQWV PVYLRDTFFA EMSITQRSDS MNSYFDGYVN ASTTLQLFVK  540
QYEKALESRY EKEVKADYDT MNTAPILKTP SPMEKQAAEA YTRKLFIKFQ EELVETLTFL  600
ATKVEEEEAT TTYRVAKFGE NHKAYFVKSD VREMKASCSC QMFEFSGLLC RHTLTVFRVT  660
NVLTLPSHYI LKRWTRNAKS GVMLEERSSD LLNGSQESPT VRYNNLRCEA LKFVDEGVKT  720
IEIFNVATDA LKEAANKVAF AKKNDGRVTS VNGTSREDCL THRNHANDTC GAHQWGSEQP  780
QSEDEQDRKI QKLTQQLERA RRKCGLYRAN LLSVLKDIEQ QKLQLTVKVQ SIKLGMKDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein