PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062729.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 824aa MW: 94857.4 Da PI: 7.5666

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.7	1.4e-31	117	209	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s s++s+r+g i++r fvC keg+r e++k t k +r+raetr+gCka+l+vk +++g+w+v+ +++eHnHel+p XP_028062729.1 117 FYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKPrrdTAKVKRPRAETRVGCKAMLVVKIQDSGRWVVSGFVKEHNHELVP 209 9*************************************999888787889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT 60 VCLSVKLFAA SFGVYAIETD YLRGGGGAAE LYIPEGDTNL EPYEGMEFES EEAAKAFYNS 120 YARRVGFSTR VSMSRRSRRD GAIIQRSFVC AKEGFRVEKE KPRRDTAKVK RPRAETRVGC 180 KAMLVVKIQD SGRWVVSGFV KEHNHELVPP DKVHCLRSHR HVSGSAKSLI DTLQGAGIGP 240 SGIMSALIRE YGGISNVGFT ERDCRNYMRS SRQRTLGGDT QLLLDYLRQK QSENPAFFYA 300 VQGDEDQCMS NIFWADPKAR ANYTYFGDTV TFDTTYRSNR YRLPFAPFTG VNHHGHPVLF 360 GSALLINESE ASFVWLFRTW LEAMSGRPPV SITTDHDRVI RLAITEVFPE TRHRFCKWHI 420 FKECQEKLSH VLIEHPNFEV ELHKYVDMSE SIEEFESCWL SLIDRYDLQE HEWLQTIYAD 480 RWQWVPVYLR DTFFAEMSIT QRSDSMNSYF DGYVNASTTL QLFVKQYEKA LESRYEKEVK 540 ADYDTMNTAP ILKTPSPMEK QAAEAYTRKL FIKFQEELVE TLTFLATKVE EEEATTTYRV 600 AKFGENHKAY FVKSDVREMK ASCSCQMFEF SGLLCRHTLT VFRVTNVLTL PSHYILKRWT 660 RNAKSGVMLE ERSSDLLNGS QESPTVRYNN LRCEALKFVD EGVKTIEIFN VATDALKEAA 720 NKVAFAKKND GRVTSVNGTS REDCLTHRNH ANDTCGAHQW GSEQPQSEDE QDRKIQKLTQ 780 QLERARRKCG LYRANLLSVL KDIEQQKLQL TVKVQSIKLG MKDQ

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MQFILETPHW YDCPKTPHHP LPQQHPAVRT IENPNSELPC PNQRFNLFTE TEPYGYGHIT  60
VCLSVKLFAA SFGVYAIETD YLRGGGGAAE LYIPEGDTNL EPYEGMEFES EEAAKAFYNS  120
YARRVGFSTR VSMSRRSRRD GAIIQRSFVC AKEGFRVEKE KPRRDTAKVK RPRAETRVGC  180
KAMLVVKIQD SGRWVVSGFV KEHNHELVPP DKVHCLRSHR HVSGSAKSLI DTLQGAGIGP  240
SGIMSALIRE YGGISNVGFT ERDCRNYMRS SRQRTLGGDT QLLLDYLRQK QSENPAFFYA  300
VQGDEDQCMS NIFWADPKAR ANYTYFGDTV TFDTTYRSNR YRLPFAPFTG VNHHGHPVLF  360
GSALLINESE ASFVWLFRTW LEAMSGRPPV SITTDHDRVI RLAITEVFPE TRHRFCKWHI  420
FKECQEKLSH VLIEHPNFEV ELHKYVDMSE SIEEFESCWL SLIDRYDLQE HEWLQTIYAD  480
RWQWVPVYLR DTFFAEMSIT QRSDSMNSYF DGYVNASTTL QLFVKQYEKA LESRYEKEVK  540
ADYDTMNTAP ILKTPSPMEK QAAEAYTRKL FIKFQEELVE TLTFLATKVE EEEATTTYRV  600
AKFGENHKAY FVKSDVREMK ASCSCQMFEF SGLLCRHTLT VFRVTNVLTL PSHYILKRWT  660
RNAKSGVMLE ERSSDLLNGS QESPTVRYNN LRCEALKFVD EGVKTIEIFN VATDALKEAA  720
NKVAFAKKND GRVTSVNGTS REDCLTHRNH ANDTCGAHQW GSEQPQSEDE QDRKIQKLTQ  780
QLERARRKCG LYRANLLSVL KDIEQQKLQL TVKVQSIKLG MKDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein