PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062768.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 712aa MW: 78234.4 Da PI: 9.4742

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.6	6.7e-09	49	91	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W t+E++ll +av+++G ++W+++a +++ +R +++++++ XP_028062768.1 49 PWGTWEELLLTCAVRRYGIESWDSVAVEIQ-KRISSTLRHHLFT 91 8*****************************.9999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MTHPCIQPDP NTKSGTERRH TKSPSACEPK PEMAIPDETT AAKVEPETPW GTWEELLLTC 60 AVRRYGIESW DSVAVEIQKR ISSTLRHHLF TAHHCKQKYL DLKLRFTPQT DAVSSNDNDD 120 AVPWLEDLRK IRVAELKREL ERSDLSILSL QSKVKRLEEE REESLREDEN GGEKSDLERK 180 SDERESEEEE KIEQHTEPEK SSPEPSAGEE SDRKPDQTGE PNGPGVSGGS SKPVGENSCN 240 GSSDSIEKEP VRESVKAEPE GGVSDSPGLL ESVAESKGGG VGEESSDVQS SASRSRKEGG 300 GGSDKVRCRT ISGDEPENED QSPTVKRKSN KSLPLVDFLE TVRSHKLGSV FERRDESQET 360 TPKYRNLIRQ HIDLETMQTR LEEGWYSGCH IKFFRDLLLL LNNAVLFYGK KSRESASVIE 420 LRKLITKEMN QRSLKLDSSS EEQPPSLPPA SLAPKPEPEL SDSLLLKQKL PGPSACRTRS 480 SLTAKATGSS LAADKKREQK AALLEEKPIL DWKQSKSSGN AEEHRVTKRR TRDWFGSGSR 540 SSNKNGTSHS NANPNKNSEA RSSQNQGKGA SSSEHSEPKS ENTNAMSGAK KRSAANFLNR 600 MKRSSSTNNG SLPDSLKSSA VSSNNNNKGG GAEQRRGGNG KAEIRKEQSS RRGSGGKQQA 660 KEQASAAKRS IGRPPKRAAA PPPSTPAPVS GKRGREGGDT ETSRKPKKRS RR

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MTHPCIQPDP NTKSGTERRH TKSPSACEPK PEMAIPDETT AAKVEPETPW GTWEELLLTC  60
AVRRYGIESW DSVAVEIQKR ISSTLRHHLF TAHHCKQKYL DLKLRFTPQT DAVSSNDNDD  120
AVPWLEDLRK IRVAELKREL ERSDLSILSL QSKVKRLEEE REESLREDEN GGEKSDLERK  180
SDERESEEEE KIEQHTEPEK SSPEPSAGEE SDRKPDQTGE PNGPGVSGGS SKPVGENSCN  240
GSSDSIEKEP VRESVKAEPE GGVSDSPGLL ESVAESKGGG VGEESSDVQS SASRSRKEGG  300
GGSDKVRCRT ISGDEPENED QSPTVKRKSN KSLPLVDFLE TVRSHKLGSV FERRDESQET  360
TPKYRNLIRQ HIDLETMQTR LEEGWYSGCH IKFFRDLLLL LNNAVLFYGK KSRESASVIE  420
LRKLITKEMN QRSLKLDSSS EEQPPSLPPA SLAPKPEPEL SDSLLLKQKL PGPSACRTRS  480
SLTAKATGSS LAADKKREQK AALLEEKPIL DWKQSKSSGN AEEHRVTKRR TRDWFGSGSR  540
SSNKNGTSHS NANPNKNSEA RSSQNQGKGA SSSEHSEPKS ENTNAMSGAK KRSAANFLNR  600
MKRSSSTNNG SLPDSLKSSA VSSNNNNKGG GAEQRRGGNG KAEIRKEQSS RRGSGGKQQA  660
KEQASAAKRS IGRPPKRAAA PPPSTPAPVS GKRGREGGDT ETSRKPKKRS RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	704	712	RKPKKRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	7e-65	MYB_related family protein