PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062788.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 328aa MW: 37573.7 Da PI: 8.1229

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40	1.3e-12	37	123	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY ++Ak+vGFs+ +++ ++ge Cs++gkr ++++ + +++ +t+++ k +++ +++kd ++ +t+++leHnH+l p XP_028062788.1 37 FYAKHAKHVGFSIACKTQVIG-DDGELRYFGIECSRSGKRIKKSEV--NPLKPSLSTKIDYKVRVQASLQKDVRFILTTVNLEHNHDLIP 123 9***********9988776.8999**********998766..9999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEIDSNSVEN PLLNESEEVE EPKKGMCFIS KQEAYTFYAK HAKHVGFSIA CKTQVIGDDG 60 ELRYFGIECS RSGKRIKKSE VNPLKPSLST KIDYKVRVQA SLQKDVRFIL TTVNLEHNHD 120 LIPTDSRHFA INKKILSPVK RKLEINNQAG IGVSRNYNSM VVEAGGYESL TFDERDARNY 180 IERARKLRLG EGDSDALQKY FLRMHAQNSS FYYMTDVDTD FRIRNLFWTD AMSRAAYKEF 240 GDVVSLDTTY LTNKYDMPFA PFVGVNNHGQ SILLGCSLLS SEDTNTFVWL FKSWLNCMSD 300 HPPKAIITDQ CKAMQKAIEI VFPNTRHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-62	FAR1 family protein