PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028062818.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 92aa    MW: 10301.6 Da    PI: 8.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028062818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.2e-1020591454
                    HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    d+i + +++L++l+P++ + +s K+s + +Le++++YI++L
  XP_028062818.1 20 DQIADLISKLQQLIPEL-RLRSDKVSGSKVLEETCNYIRNL 59
                    6899************6.58*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRQ SGGVSRISDD QIADLISKLQ QLIPELRLRS DKVSGSKVLE ETCNYIRNLH  60
REVDDLSDRL SELLASTDSN SAQAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.16e-40bHLH family protein