PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028062874.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 166aa    MW: 19641.1 Da    PI: 5.414
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028062874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.96.3e-13129645128
             NAM  45 wdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++L k   k+++++k +y F++ +kk+ +gkr  r++ + +Wk   + k++++++g+l+g k+++ + +  ++++e++ W m+ey+l
  XP_028062874.1  12 QELSKifnKMSTKSKLYYCFMELNKKNGKGKRIDRMVGKVTWKGLDRGKPIHDNEGRLTGRKRSFDYIN--RESSEHSVWDMKEYSL 96 
                     566533346666777889**************************************************4..444469********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MITNECNLYD DQELSKIFNK MSTKSKLYYC FMELNKKNGK GKRIDRMVGK VTWKGLDRGK  60
PIHDNEGRLT GRKRSFDYIN RESSEHSVWD MKEYSLEGVS LEDDQLIKDK NYVLCVIKRK  120
RRRVEIEQQE QPVDDSDIDH YSVEDDQPAP VIQQEEQPTA TFIQQE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118123KRKRRR
2119123RKRRR
3120124KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.12e-08NAC family protein