PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028062987.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 266aa    MW: 30528.2 Da    PI: 4.744
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028062987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.3e-135496754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A++YI++L
  XP_028062987.1 54 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIDYIQEL 96
                    57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MENIGDEYKH YWETNMFLQT EELDSWGLDE AFSGYYDSSS PDGAQSSAAS KNIVSERNRR  60
KKLNERLFAL RSVVPNISKM DKASIIKDAI DYIQELHEQE GRIQAEIREL ASGKSMENKY  120
NYATVFDDME EQQQQHQHHD DDHEQEDLPA LLRSKKKRID LTYDSRCSRA SSPSPIEDLE  180
LRVSYMGEKT VVVSLTCSKR TDTMIKLCEV FESLKLKIIT ANITAFSGRL LKTVFVEAEE  240
EEKDHLKMKI ETAIAALNDP ESPMST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-91bHLH family protein