PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063065.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 305aa    MW: 33674 Da    PI: 7.7411
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-1296139855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++     +K +K++i+ +Av +IksLq
  XP_028063065.1  96 TERERRKKMRNMFSNLHALLPHL----PPKADKSTIVDEAVTHIKSLQ 139
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSDLGGGHEN FFWETQSWAF SNSNDLGYIG EKSGGKPPPD SGSNTQTPTK KEVEEVIPVA  60
PGKKRGGLGK NGKGRGGEAN EGKGGNESDH EIHIWTERER RKKMRNMFSN LHALLPHLPP  120
KADKSTIVDE AVTHIKSLQQ TLQKLQRQKL ERLHGLTPMN FDGQSSIITP QKLSMDSRQA  180
FMADEVSSNN TNSNSSNALS VSLSRFPPLF QTWTSPNVIL NVCGDHAQIS VCSIKKAGLF  240
TVICYVLEKH KLDVVSAHVS SDQNWTMYMI QAHARIAPDQ LPEAFPVEEI YKQAAGEIMV  300
WLSAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-33bHLH family protein