PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063068.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 209aa    MW: 23766.7 Da    PI: 10.1993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-1130711055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r RR+++++ f++L  llP++     +K++K++i+ +Av +IksLq
  XP_028063068.1 30 RERRKKMRNMFSNLHALLPHL----PPKVDKSTIVDEAVTHIKSLQ 71
                    89******************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MILIEYKKPN NALTLFIYLP TLDIHIWTAR ERRKKMRNMF SNLHALLPHL PPKVDKSTIV  60
DEAVTHIKSL QQTLQKLQRQ KLERLHGLTP MNFDGQSSII TPQKLPMDLR EAFMADQVSS  120
NNTNSNSSNA LPVSLSRFPP LFQTWTSPNV ILNVCGDHAQ NSVCSMKKAG LFTAICYVLE  180
KHKLDVVSAR VSSDQNRTMY MIQAHVSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-38bHLH family protein