PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063075.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 667aa MW: 76886.6 Da PI: 6.3857

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.7	1.7e-22	60	142	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH ++ XP_028063075.1 60 FYNCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMVKFRLMDNKRWRIIEVELEHNHLIS 142 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MDDVSLNSEP VYDDEADEFE IEGDCGMTEY IRQGGVIQGE NPIPPSVGME FESYEDVYYF 60 YNCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMVKF 120 RLMDNKRWRI IEVELEHNHL ISPKSGKFYK SHKNLGAGTK RPQPLVGAEE AHKVRLFRTV 180 IIDTEDIGNL YVDDGEFGNT IDQSNQLKLK QGDAQAIYNS FCHLQLMSPN FFYVMDLNEK 240 GYMRNLFWAD ARCRAAYGYF GDVVSIDTTC LTDKFEVPLV VFTGVNHHGQ PVLLGCGLLA 300 SETVESFTWL FRAWLTYMLG RPPQAIITDQ HKSLQAALSD VFPRASQCLC LWHIMKKVPE 360 KLGGLNGYEA IMVALIRAVY HSFRADEFEA AWEDMILRHE IGDHKWLQAL YEDRKRWVPV 420 YLKETFLAGM FPIKPSEGVT SFFEGFLHKH TPLKDFLSKY DQVLQKIHQE EASADLVSRT 480 SISALKTRFY FELQLSKLYT NSIFKKFQSE VEGLYSCFST RQVSIDGSII TYIVKEHTEI 540 TENGRETRDY EVMYNTSEAE VLCACGLFNF QGYLCRHALN ILNQNGIEEI PPQYILSRWR 600 KDIRRNFVLD HGCNGIDVMN PVHRFDRLYK CGVQVVEEGR KSEDCFKFVL QALDEILNKV 660 RIAEDLV

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MDDVSLNSEP VYDDEADEFE IEGDCGMTEY IRQGGVIQGE NPIPPSVGME FESYEDVYYF  60
YNCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMVKF  120
RLMDNKRWRI IEVELEHNHL ISPKSGKFYK SHKNLGAGTK RPQPLVGAEE AHKVRLFRTV  180
IIDTEDIGNL YVDDGEFGNT IDQSNQLKLK QGDAQAIYNS FCHLQLMSPN FFYVMDLNEK  240
GYMRNLFWAD ARCRAAYGYF GDVVSIDTTC LTDKFEVPLV VFTGVNHHGQ PVLLGCGLLA  300
SETVESFTWL FRAWLTYMLG RPPQAIITDQ HKSLQAALSD VFPRASQCLC LWHIMKKVPE  360
KLGGLNGYEA IMVALIRAVY HSFRADEFEA AWEDMILRHE IGDHKWLQAL YEDRKRWVPV  420
YLKETFLAGM FPIKPSEGVT SFFEGFLHKH TPLKDFLSKY DQVLQKIHQE EASADLVSRT  480
SISALKTRFY FELQLSKLYT NSIFKKFQSE VEGLYSCFST RQVSIDGSII TYIVKEHTEI  540
TENGRETRDY EVMYNTSEAE VLCACGLFNF QGYLCRHALN ILNQNGIEEI PPQYILSRWR  600
KDIRRNFVLD HGCNGIDVMN PVHRFDRLYK CGVQVVEEGR KSEDCFKFVL QALDEILNKV  660
RIAEDLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein