PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063252.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 611aa MW: 71550.1 Da PI: 8.4548

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.8	1.5e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsvr+s+++ + +n+ + +r++vCs+eg re++ + e+ r++raetr C+a+++v+ +k k++vt+++ eHnH+la XP_028063252.1 65 FYNAYAKVIGFSVRRSRKRITGDNKFVESRKWVCSREGVREKKYLQrVERVRTPRAETRLFCNATFRVRYDKtARKYVVTHFVGEHNHPLA 155 ***************************************9988846777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA 120 ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM 180 CNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQDERK VQIAEGDAEG ALGYLSAKLD 240 ADPLFFFKYN VDKDNRLDKI FWADYRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS 300 NHFMTTIFRC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR 360 HRLCSWHLEK NASTNVHIPE FTADFAQLML KKCKIDEFDN AWAVMVKQYK LENNNWVLDI 420 HLKRDNWAEA YLYGHMFAGM RSTQRVEGMN AYFNIFLNQK VRLYEFVAQY DRALARMRVN 480 EAETESKTEN SFPVLTTPLR SLEKHAAELF TRKIFSLFQH EIRKEGKLFM MERVQLEDHR 540 TYRFGEYKAP TCTWTVEYFP ANITMKCCCL KFESFGIPCC HMIAVMKSEQ LMCIPPSCVL 600 QRWTRRGRSK C

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA  120
ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM  180
CNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQDERK VQIAEGDAEG ALGYLSAKLD  240
ADPLFFFKYN VDKDNRLDKI FWADYRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS  300
NHFMTTIFRC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR  360
HRLCSWHLEK NASTNVHIPE FTADFAQLML KKCKIDEFDN AWAVMVKQYK LENNNWVLDI  420
HLKRDNWAEA YLYGHMFAGM RSTQRVEGMN AYFNIFLNQK VRLYEFVAQY DRALARMRVN  480
EAETESKTEN SFPVLTTPLR SLEKHAAELF TRKIFSLFQH EIRKEGKLFM MERVQLEDHR  540
TYRFGEYKAP TCTWTVEYFP ANITMKCCCL KFESFGIPCC HMIAVMKSEQ LMCIPPSCVL  600
QRWTRRGRSK C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein