PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063348.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 75aa    MW: 8531.18 Da    PI: 4.0944
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.7e-112669146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++ ++++E+ l+ +  ++ G + W++Ia +++ gRt++++  +w++
   XP_028063348.1 26 KLEFSEDEETLITRMYNLVGER-WSLIAGRIP-GRTAEEIEKYWNS 69
                     678*******************.*********.***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MADLEHSTSD DASVDSRAED PSQDSKLEFS EDEETLITRM YNLVGERWSL IAGRIPGRTA  60
EEIEKYWNSR YSTSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.11e-18MYB_related family protein