PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063392.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 172aa    MW: 19842.5 Da    PI: 10.694
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.58.5e-3787153268
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtsss 68 
                      gk+drhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k+ai eltg+  +
  XP_028063392.1  87 SGKTDRHSKIYTANGPRDRRMRLSVQIARKFFDLQDMLGFDKASKTIEWLFSNSKAAIRELTGNLPQ 153
                     689***********************************************************99433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MFRQSGTNEA SPNSRQEDPT FLFLHFPSPF LDNSDPLFVP QQDEIIDSHR TDREIHMEGS  60
KKPPRFCLKR KKRTDDGAKN PNPRKRSGKT DRHSKIYTAN GPRDRRMRLS VQIARKFFDL  120
QDMLGFDKAS KTIEWLFSNS KAAIRELTGN LPQLNYNCGR HGKAERVVLV GV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16989KRKKRTDDGAKNPNPRKRSGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-29TCP family protein