PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063402.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 261aa MW: 29570.1 Da PI: 6.5128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.7	4.8e-09	151	198	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++Y++sLq XP_028063402.1 151 SHSLAERLRREKINEKLRSLQDLVPGC----YKTMGMAVMLDVIIKYVQSLQ 198 8*************************8....355888888888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MADFNVEFHN LKPLFSEMNN SNMDLLNNLS SFENLNSHVQ GLVSLSSNHD SFLDHHHHQL 60 SQLPMTFTDT NIQSSVHSDS PFYDPLTHFL PSTEGPSLED NSLKGTSETD NKKKRNYSSG 120 GKKRKRGNER EVEKPREVIH VRAKRGQATD SHSLAERLRR EKINEKLRSL QDLVPGCYKT 180 MGMAVMLDVI IKYVQSLQNQ IEFLSMKLSA ASLFYDFNSE MEPMETMQVT NGFEAQGMER 240 TVGEGYGGGF SHFPPPSAWP L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	126	KKKRNYSSGGKKRKR
2	121	127	GKKRKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	2e-54	bHLH family protein