PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063608.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 627aa MW: 68203.1 Da PI: 6.2856

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.9	2.7e-16	415	461	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_028063608.1 415 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 461 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MPFSEFYGMA SGKLESAQQK TTTCLTDLSH VPHNEFVELV WENGQIMMQG QSSRARRSST 60 TNNLQSQTPK LQDKDLVKMD SVLNYFTTES PSGEMGLGQD DDTVPWLNFP ISDSLQHDYY 120 SELLPELSSV TVNENSCNQS IRGSHSVSLG NDLSLEQANA SEVRSSEIEE SSRARSGQFH 180 DPWLFQENQT SIPSLRSKVS GIISNTSCNN KRDAIIVQPN LSRRPNTSSS FMNFPHFSRP 240 STLVRANLQT IDAITSPGTS NVEPMGGKNK GNDPCSGYFA QSALFDFSSG LRKEMGTHSQ 300 PNLDSEPVMA KRLEESRTAE QSNPVCREDA AKNVELPNQV RGEKTTEPVV ASSSACSGNS 360 AERASNETHN LKRKCSENDD SEGRSEDVEE ESVGVRKAAP ARGGTTSKRG RAAEVHNLSE 420 RRRRDRINEK MRALQELIPN CNKVDKASML DEAIEYLKTL QLQVQIMSMG TGLYMPPMML 480 PTGMQHVHAA QMACFSPMAV GMGMRMGIGM GMLDMNGGSP ACSMIQVPPT QGTLFSTPRP 540 PPYSGPTNSQ GMAGSNLHIF GHPSQGFSMS APRRQLAPLS GGPRPPINSA MGVNANVEGP 600 NSAPLANSKD LIQNTNSQMM HNADASS

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MPFSEFYGMA SGKLESAQQK TTTCLTDLSH VPHNEFVELV WENGQIMMQG QSSRARRSST  60
TNNLQSQTPK LQDKDLVKMD SVLNYFTTES PSGEMGLGQD DDTVPWLNFP ISDSLQHDYY  120
SELLPELSSV TVNENSCNQS IRGSHSVSLG NDLSLEQANA SEVRSSEIEE SSRARSGQFH  180
DPWLFQENQT SIPSLRSKVS GIISNTSCNN KRDAIIVQPN LSRRPNTSSS FMNFPHFSRP  240
STLVRANLQT IDAITSPGTS NVEPMGGKNK GNDPCSGYFA QSALFDFSSG LRKEMGTHSQ  300
PNLDSEPVMA KRLEESRTAE QSNPVCREDA AKNVELPNQV RGEKTTEPVV ASSSACSGNS  360
AERASNETHN LKRKCSENDD SEGRSEDVEE ESVGVRKAAP ARGGTTSKRG RAAEVHNLSE  420
RRRRDRINEK MRALQELIPN CNKVDKASML DEAIEYLKTL QLQVQIMSMG TGLYMPPMML  480
PTGMQHVHAA QMACFSPMAV GMGMRMGIGM GMLDMNGGSP ACSMIQVPPT QGTLFSTPRP  540
PPYSGPTNSQ GMAGSNLHIF GHPSQGFSMS APRRQLAPLS GGPRPPINSA MGVNANVEGP  600
NSAPLANSKD LIQNTNSQMM HNADASS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	420	425	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-62	bHLH family protein