PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063675.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 352aa MW: 39181.9 Da PI: 6.1927

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.2e-14	167	213	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_028063675.1 167 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 213 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MMCGKKEQEE EEDCSQTIHN IQSYQEQLLF HHHHQQMHQQ NCTTTTDAYM DGVGVGVGVG 60 VSPILPWSLP PVHSFNQVHF ASNPTRDDDP FLLPPPQSTY GGFLNRRGPS LQFAYDGSPS 120 DHLRIISDTL GQVVHHHGSA APFGLQAELG KMTAQEIMDA KALAASKSHS EAERRRRERI 180 NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV KELKRQTSLI AETSPVPTEV DELSVDASDD 240 EDGKFLIRAS LCCEDRSDLL PDLIKTLKAL RLRTLKAEIT TLGGRVRNVL FITGEEDSDS 300 GDQQQQQQQQ YCLSSIQEAL KAVMEKTNGD DSSSGSIKRQ RTNMNILEHR SL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MMCGKKEQEE EEDCSQTIHN IQSYQEQLLF HHHHQQMHQQ NCTTTTDAYM DGVGVGVGVG  60
VSPILPWSLP PVHSFNQVHF ASNPTRDDDP FLLPPPQSTY GGFLNRRGPS LQFAYDGSPS  120
DHLRIISDTL GQVVHHHGSA APFGLQAELG KMTAQEIMDA KALAASKSHS EAERRRRERI  180
NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV KELKRQTSLI AETSPVPTEV DELSVDASDD  240
EDGKFLIRAS LCCEDRSDLL PDLIKTLKAL RLRTLKAEIT TLGGRVRNVL FITGEEDSDS  300
GDQQQQQQQQ YCLSSIQEAL KAVMEKTNGD DSSSGSIKRQ RTNMNILEHR SL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-86	bHLH family protein