PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063889.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 186aa    MW: 21618.6 Da    PI: 8.1001
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.23.1e-2436122189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++ + Fs+r+++++ksk++g +++ +fvC+keg+++++++     ++++++trt+Cka l v++++  +kw++tk++  HnH +
  XP_028063889.1  36 QFYNEYGRIMRFSIRRDYHTKSKKDGIMVTGKFVCYKEGEKDKQSEM---VKQPQQHTRTNCKAFLYVSLDReLSKWVITKFDDTHNHIM 122
                     6***************************************9998877...9999****************9989**************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDIDGLERSI EDNTRLLKEH TPSLGTEFES KEIAYQFYNE YGRIMRFSIR RDYHTKSKKD  60
GIMVTGKFVC YKEGEKDKQS EMVKQPQQHT RTNCKAFLYV SLDRELSKWV ITKFDDTHNH  120
IMHLPQCAHT MPSQRKVSEA QSINMELADA IGLLLKASHD FISTQAGGGE FVGFMREDQK  180
SYLRVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-22FAR1 family protein