PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064082.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 437aa MW: 51213.3 Da PI: 8.0643

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.5e-07	14	60	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 +ek+r ++a+tr+g ka+++++ + +gk++vt+++ +HnHela XP_028064082.1 14 AEKSRAPKAQTRVGYKAQFRIRYDAdageEGKYVVTHFVADHNHELA 60 688999**************987777799************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEGQRLPKYL DRVAEKSRAP KAQTRVGYKA QFRIRYDADA GEEGKYVVTH FVADHNHELA 60 EQHCAMYLRS HRSLNSANKA QAMAMRNVNV KTSQIMDFMV NQSGSYENVG FIRTDLHNHI 120 QAERRAKVED SDAQANETID TYTWVLETFM EAMGNKEPVF VLTDGDKAMR EAIRRVFQDT 180 RHRLCNWHLG KNIVSNVHKS GFTHAFKQCM DMETDETKFE HGWTTMIEKF GLQTNSWVLE 240 TYEKRHMWAE AYMRGHFFVG MKSTQHSESM DAYFNPFLQH KLKLYEFVGH YDRALARIRY 300 NEAGDDVETN NTFPVLITLL RDIERHVAEL FTRNIFRMFR DEILEDGKLN VKDVFPLPDG 360 QKYYYIHKYK VKDRSWIVTH SLVDAAMRCS YMKFESLGLP CCHMICVMKA ENLTQIPLTC 420 VPHRWTRAAS KDGQQWP

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEGQRLPKYL DRVAEKSRAP KAQTRVGYKA QFRIRYDADA GEEGKYVVTH FVADHNHELA  60
EQHCAMYLRS HRSLNSANKA QAMAMRNVNV KTSQIMDFMV NQSGSYENVG FIRTDLHNHI  120
QAERRAKVED SDAQANETID TYTWVLETFM EAMGNKEPVF VLTDGDKAMR EAIRRVFQDT  180
RHRLCNWHLG KNIVSNVHKS GFTHAFKQCM DMETDETKFE HGWTTMIEKF GLQTNSWVLE  240
TYEKRHMWAE AYMRGHFFVG MKSTQHSESM DAYFNPFLQH KLKLYEFVGH YDRALARIRY  300
NEAGDDVETN NTFPVLITLL RDIERHVAEL FTRNIFRMFR DEILEDGKLN VKDVFPLPDG  360
QKYYYIHKYK VKDRSWIVTH SLVDAAMRCS YMKFESLGLP CCHMICVMKA ENLTQIPLTC  420
VPHRWTRAAS KDGQQWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-44	FAR1 family protein