PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064186.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 733aa MW: 83635.6 Da PI: 6.9202

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	95.8	5e-30	78	170	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fYn+Y+++vGFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk ++ +gkw+v+ +++eHnHel+p XP_028064186.1 78 FYNSYGRRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKIQDsSGKWVVSGFVKEHNHELVP 170 9*************************************998888545677889*************99***************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MENEVIEFDI GLGGGDAVSG DDDHHHLVID EDMAADDASP TGPGGGFGGG EIYIPEGDPD 60 LEPYEGMEFE SEEAAKAFYN SYGRRVGFST RVSSSRRSRK DGAIIQRSFV CAKEGFRNLN 120 EKRTKDREIK RPRTITRVGC KASLSVKIQD SSGKWVVSGF VKEHNHELVP PDQVHCLRSH 180 RQISGPAKTL IDTLQAAGMG PRRIMSVLIK EYGGISKVGF TEVDCRNYIR TNRQRSFEGD 240 IQLLLDYLRQ MHAENPSFFY AVQGDETGNV FWADPKAKMN YTYFGDTVTF DTTYRSNRYR 300 LPFAPFTGIN HHGQPVLFGC AFLMNESEAS FVWLFKTWLM AMSGRPPLSI TTDHDVVIQA 360 AILQVFPDTR HRFCKWHIFK KCQEKLSHVF LKHPNFEADF HKCVNLADSI EEFESCWLSL 420 VDKYDLRDHE WLQTIYSARR QWVPVYLRDT FFAEMSITQR SDSMNSYFDG FVNASTNLNQ 480 FFKLYEKALD SRNEKEVKAD FDTMNASPVL KTPSPMEKQA SKLYTRKLFA RFQEELVGTL 540 TFMASKVEDN GEVTAYQVAK FGEDHKAYYV KFNVLEMRAT CSCQMFEFSG LLCRHILAVF 600 RVTNVLTLPL HYILKRWTRN AKSTIMLEER PCDVFSSYLE SHTVRYNTLR HEAFKFVDEG 660 AESVDCYNVA MVALQEAAKR VALATKNEGK TPMINGRIRE NSTNDGSQAN YSSGDHPRSI 720 SQQLSEFIPK CCS

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MENEVIEFDI GLGGGDAVSG DDDHHHLVID EDMAADDASP TGPGGGFGGG EIYIPEGDPD  60
LEPYEGMEFE SEEAAKAFYN SYGRRVGFST RVSSSRRSRK DGAIIQRSFV CAKEGFRNLN  120
EKRTKDREIK RPRTITRVGC KASLSVKIQD SSGKWVVSGF VKEHNHELVP PDQVHCLRSH  180
RQISGPAKTL IDTLQAAGMG PRRIMSVLIK EYGGISKVGF TEVDCRNYIR TNRQRSFEGD  240
IQLLLDYLRQ MHAENPSFFY AVQGDETGNV FWADPKAKMN YTYFGDTVTF DTTYRSNRYR  300
LPFAPFTGIN HHGQPVLFGC AFLMNESEAS FVWLFKTWLM AMSGRPPLSI TTDHDVVIQA  360
AILQVFPDTR HRFCKWHIFK KCQEKLSHVF LKHPNFEADF HKCVNLADSI EEFESCWLSL  420
VDKYDLRDHE WLQTIYSARR QWVPVYLRDT FFAEMSITQR SDSMNSYFDG FVNASTNLNQ  480
FFKLYEKALD SRNEKEVKAD FDTMNASPVL KTPSPMEKQA SKLYTRKLFA RFQEELVGTL  540
TFMASKVEDN GEVTAYQVAK FGEDHKAYYV KFNVLEMRAT CSCQMFEFSG LLCRHILAVF  600
RVTNVLTLPL HYILKRWTRN AKSTIMLEER PCDVFSSYLE SHTVRYNTLR HEAFKFVDEG  660
AESVDCYNVA MVALQEAAKR VALATKNEGK TPMINGRIRE NSTNDGSQAN YSSGDHPRSI  720
SQQLSEFIPK CCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein