PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064251.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 168aa MW: 19488 Da PI: 10.3123

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.5e-08	10	54	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+eE +++ +a +++ + +W ++ ++++ g++ +++ ++ XP_028064251.1 10 EWTKEENKRFERALAMYDEKtpdRWLKVTAMIP-GKSVYDVMRWYK 54 7******************************.*****99886 PP
2	Myb_DNA-binding	45.6	1.6e-14	110	155	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++E+ +++ + +++G+g+W+ I+r + k +t+ q+ s+ q+++ XP_028064251.1 110 PWTEDEHRRFLMGLQKHGKGDWRNISRNFVKSKTPTQVASHAQMWR 155 8******************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MLVQESKSPE WTKEENKRFE RALAMYDEKT PDRWLKVTAM IPGKSVYDVM RWYKELEADV 60 SNIEAGRVPF PGYVTSSVTL EMVDNHGFDG FRKRPLTGRS SDQQRKKGVP WTEDEHRRFL 120 MGLQKHGKGD WRNISRNFVK SKTPTQVASH AQMWRGPADG QSETAARR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	4e-68	MYB family protein