PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064304.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 524aa MW: 61133.1 Da PI: 5.6968

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.7e-21	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +v Fs+rk++ +k+k+++eit++tfvC+ke +r +k++ ++ r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028064304.1 64 DFYNTYGGNVSFSIRKAYANKNKHTKEITSHTFVCYKERSRGIDKRD-PLVKNLRQEVRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 154 6****************************************9999.889999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MAEMEEQRDG EQRIVGDGES GGDAMAGRQH CSDDEVMEES NIVDDCGWKP KVGMSFDSEQ 60 AAYDFYNTYG GNVSFSIRKA YANKNKHTKE ITSHTFVCYK ERSRGIDKRD PLVKNLRQEV 120 RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPQDCIHM LPSQSKISTT QTIEVELASQ 180 SGIPLRSAYE LFGRESSGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFHKKVVEN 240 PSFFFAVQLD CDEQISNIFW ANAQMIMDYA QFRDVVTFGI TYKLNNEHRP FGSFVGFNHH 300 RETVIFGAAL MYDETTESFT WLFQIFLEPM SNKAPKTIFM DQDAAMAKAI PIVMPDTNHR 360 LCTWHLMQNA IKHVSSVFDD VGVKVVFSKF MHDIDDEEDF RIQWDQMLDK YDAFDNHWLE 420 QTFRVKEKWR WPYIMNSWAA GMSTTQLSES FNAFLKDYLN CDHNLMEFVM HFERVLYEKR 480 YKELEAEYNL FQKLPRVSIP TLMLKQVVEI YTKTIFEEFQ NEYV

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MAEMEEQRDG EQRIVGDGES GGDAMAGRQH CSDDEVMEES NIVDDCGWKP KVGMSFDSEQ  60
AAYDFYNTYG GNVSFSIRKA YANKNKHTKE ITSHTFVCYK ERSRGIDKRD PLVKNLRQEV  120
RCGCGARFSI KLDRISGKYI ACDFVEHHNH DLVPQDCIHM LPSQSKISTT QTIEVELASQ  180
SGIPLRSAYE LFGRESSGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFHKKVVEN  240
PSFFFAVQLD CDEQISNIFW ANAQMIMDYA QFRDVVTFGI TYKLNNEHRP FGSFVGFNHH  300
RETVIFGAAL MYDETTESFT WLFQIFLEPM SNKAPKTIFM DQDAAMAKAI PIVMPDTNHR  360
LCTWHLMQNA IKHVSSVFDD VGVKVVFSKF MHDIDDEEDF RIQWDQMLDK YDAFDNHWLE  420
QTFRVKEKWR WPYIMNSWAA GMSTTQLSES FNAFLKDYLN CDHNLMEFVM HFERVLYEKR  480
YKELEAEYNL FQKLPRVSIP TLMLKQVVEI YTKTIFEEFQ NEYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein