PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064308.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 257aa    MW: 30530.5 Da    PI: 5.1674
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.22.1e-21147237190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +f+n+YAk  GFs+r+++ +k k+n  +++r++vCskeg+r+++  + +e++r++++ t++gC+a++ +k ++ ++k+e++++ +eHnH++ 
  XP_028064308.1 147 RFFNSYAKVKGFSIRRDQLYKDKNNM-VISRNWVCSKEGHRQSKYLEiKERKREPKQLTKVGCRACFCIKYNRrTSKYEMNEFFKEHNHSMI 237
                     59*******************96666.9***************99887899999*****************999***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEDNTEQNKN TIIYELDDDN GNDGKYNIHN EDNNVNSNDI LTKRDIKHLD ELTENDVFEM  60
TFDSEENGER FFNSYAKVKD NTEQNKNTII YELDDDNGND GKYNIHNEDN NVNSNDILTK  120
RDIKHLDELT ENDVFEMTFD SEENGERFFN SYAKVKGFSI RRDQLYKDKN NMVISRNWVC  180
SKEGHRQSKY LEIKERKREP KQLTKVGCRA CFCIKYNRRT SKYEMNEFFK EHNHSMIRPL  240
GVQFLRSHRN VTSADKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-18FAR1 family protein