PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064585.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 248aa    MW: 27931.1 Da    PI: 5.8352
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1705.6e-2291185190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 
                     +fYn+YAk  GFs+++s+ +++ ++g++++r + Cs+eg+r ++  +  +ek+r ++a tr+gCka+++++ +      gk++vt+++ +HnHel
  XP_028064585.1  91 DFYNAYAKAKGFSIQRSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 184
                     6*****************9999.666699999*********99988877899999****************987677789**************9 PP

            FAR1  90 a 90 
                     a
  XP_028064585.1 185 A 185
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MARAEVQREG DDYDIPNEAD DICLMNESRV EPYHGCEAGP SNEEATNMNV EDGGADVKKE  60
MVDDAHGNDM VGDVERAILE QKFDSVEDGE DFYNAYAKAK GFSIQRSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN IAGKAQAIAM RNIGVKTSQI MDYMVNQSGS YENVGFVRTD  240
LHNHSSRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-21FAR1 family protein