PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064598.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 501aa MW: 57790.7 Da PI: 8.5127

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.6	4.8e-24	89	178	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ Fs+r+++ +k k +++ ++r +vC+keg+r+ +k+ ++++raetrtgC+a+l +k+++ +gk++v++++++HnH+l+ XP_028064598.1 89 DFYNTYGGRMWFSIRRDYCRKDKFTNQLIHRLLVCNKEGFRKVDKRG-PLSKNSRAETRTGCEARLYIKLHEgTGKYVVIDFKEKHNHDLV 178 6*****************************************999.9999****************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MGVGGGDGEG SQLSEMVTSV AGSWGIMVAV VGRGSRKGKT VVEEVARREG LGRGHRRTDN 60 ACRSCWQRLW LPEVENEGMV FDSEQCAYDF YNTYGGRMWF SIRRDYCRKD KFTNQLIHRL 120 LVCNKEGFRK VDKRGPLSKN SRAETRTGCE ARLYIKLHEG TGKYVVIDFK EKHNHDLVSP 180 ECAHMLLSQR KISTIQVIQL DLAAQSGLRL GQSFKLMGRE AGGRQCLGFT KLDSKNYLRT 240 KRQQSLAYGE VGSVLQYFKE KSLQNPSFFY VVQLDNEEQI TNMFWADAQM IMDYAQFGDV 300 VTFDTTYKLN KEHRPFASFV GFNHHRETVI FGTALLYNET AESFVWLFEN FLEAMSRKAP 360 KTLFTDQDAA MAKAIPIVMP DTSHRLCTWH LMQNALKHVN CLFQDNGVKG VLNKFFFHIE 420 DANQWKLEWA EMLDKYDTHE NHWLKLTFAD YIRSDFNLNE FFMHFERVLY EKRYKELEAG 480 YAFVAKVANG QSNNKNVNSN G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MGVGGGDGEG SQLSEMVTSV AGSWGIMVAV VGRGSRKGKT VVEEVARREG LGRGHRRTDN  60
ACRSCWQRLW LPEVENEGMV FDSEQCAYDF YNTYGGRMWF SIRRDYCRKD KFTNQLIHRL  120
LVCNKEGFRK VDKRGPLSKN SRAETRTGCE ARLYIKLHEG TGKYVVIDFK EKHNHDLVSP  180
ECAHMLLSQR KISTIQVIQL DLAAQSGLRL GQSFKLMGRE AGGRQCLGFT KLDSKNYLRT  240
KRQQSLAYGE VGSVLQYFKE KSLQNPSFFY VVQLDNEEQI TNMFWADAQM IMDYAQFGDV  300
VTFDTTYKLN KEHRPFASFV GFNHHRETVI FGTALLYNET AESFVWLFEN FLEAMSRKAP  360
KTLFTDQDAA MAKAIPIVMP DTSHRLCTWH LMQNALKHVN CLFQDNGVKG VLNKFFFHIE  420
DANQWKLEWA EMLDKYDTHE NHWLKLTFAD YIRSDFNLNE FFMHFERVLY EKRYKELEAG  480
YAFVAKVANG QSNNKNVNSN G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-86	FAR1 family protein