PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064687.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 552aa MW: 60173.8 Da PI: 6.0913

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.2e-09	359	406	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_028064687.1 359 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 406 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MEKEKLFLSE ENTMLPTWNS SSSFGMEIQS NHLNCSSEQL PNCFFNPNWD NNSMDQTDPF 60 ESALSSMVSS PAAAASGGDG VVLRELIGRL GSICNSGGGG GGEMSPPPYI GANNNNSTNN 120 SSYSTPLNSP PKLNLSIMDH QIRGNLQIPG NNLQSSTPFS TDPGFAERAA KFSSFGSKNF 180 GQFGQIESEM GHRLVPRMEL GKISVTSSTH QSMKFAGSSM GLQENKDGLL QEGNWGSDKK 240 FTRLSRSSTP ENGEFGDSRE ESSVSEQIPG GEIGIKGQND ANARKRKSIP KGKGKETPSS 300 SSPVKDSKVV SGNDESNSKR SKADENVKVA EQSKDSAKPP EPPKDYIHVR ARRGQATDSH 360 SLAERVRREK ISERMKFLQD LVPGCNKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN 420 PRMEFNIEAL LSKDIFQTRG SMPNNIYPVE STTPPFPYGY QHSGIPNGTE NPFSLNPLNA 480 ALRRNLGSQL PSIDGFGEAA SQASTFWEDD LQSVVQMGFG QNQPQNFHGS LLRQHDNCPN 540 LDEGTAQMKV EL

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MEKEKLFLSE ENTMLPTWNS SSSFGMEIQS NHLNCSSEQL PNCFFNPNWD NNSMDQTDPF  60
ESALSSMVSS PAAAASGGDG VVLRELIGRL GSICNSGGGG GGEMSPPPYI GANNNNSTNN  120
SSYSTPLNSP PKLNLSIMDH QIRGNLQIPG NNLQSSTPFS TDPGFAERAA KFSSFGSKNF  180
GQFGQIESEM GHRLVPRMEL GKISVTSSTH QSMKFAGSSM GLQENKDGLL QEGNWGSDKK  240
FTRLSRSSTP ENGEFGDSRE ESSVSEQIPG GEIGIKGQND ANARKRKSIP KGKGKETPSS  300
SSPVKDSKVV SGNDESNSKR SKADENVKVA EQSKDSAKPP EPPKDYIHVR ARRGQATDSH  360
SLAERVRREK ISERMKFLQD LVPGCNKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN  420
PRMEFNIEAL LSKDIFQTRG SMPNNIYPVE STTPPFPYGY QHSGIPNGTE NPFSLNPLNA  480
ALRRNLGSQL PSIDGFGEAA SQASTFWEDD LQSVVQMGFG QNQPQNFHGS LLRQHDNCPN  540
LDEGTAQMKV EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23690.1	3e-74	bHLH family protein