PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064720.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 291aa    MW: 32549.3 Da    PI: 9.5072
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.32e-1481125347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k+ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_028064720.1  81 PWTEEEHKLFLLGLKKVGKGDWRGISRNFVKTRTPTQVASHAQKY 125
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSSFCSESAT NGHNSHTEIM LFXVRVKSIR XQESVSMNNL SQYEQPQESS NVAAAAAGYA  60
SADEAVHHHS SGNRERKRGV PWTEEEHKLF LLGLKKVGKG DWRGISRNFV KTRTPTQVAS  120
HAQKYFLRRS NLNRRRRRSS LFDITTESVN SIPMEEEKVH QEGKAQPLQA PTQLPPPETS  180
NISGSQVLPF PMTVHPVLVP VQIENPMEKL TLGQMDHLHR ESAMLIRPIP VLPIPNATTM  240
VDLNLNQKSM EDPVPLSLNL SLSSDQNQFS RHSAFRVMSS FNNGDSIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.27e-35MYB_related family protein