PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064886.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 228aa    MW: 25518.3 Da    PI: 8.157
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-055981123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_028064886.1 59 YTCGFCKREFKSAQALGGHMNVH 81
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MERNSLSNNL KHHSIDGGRS MKEDCNNNNN RVKDSWESCK SDRHGEDFLN GFSWPPRSYT  60
CGFCKREFKS AQALGGHMNV HRRDRARLRQ SPPPRDGQYP FLNLNLSPNP NPSPNSNPYQ  120
NLNNPSTPFT STLSPLFSPS ISSLSSSASV SASEIMKRGT DNTLFHHRLS NRNTDFSKTL  180
FGVEIEHFAQ VSGCAVSKTA EIVRVDLEIG LLRDPKDDLD LELHLGCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-24C2H2 family protein