PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064965.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 174aa    MW: 19092 Da    PI: 8.2043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-161868155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr+       +  r +lg++ t e Aa a++ a  +l+g
  XP_028064965.1 18 KKYKGVRRRK-WGKWVSEIRVqG-----TqDRLWLGSYSTVEAAAVAHDVASYCLRG 68
                    59*****998.**********44.....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSSSNESSGG GATTAEQKKY KGVRRRKWGK WVSEIRVQGT QDRLWLGSYS TVEAAAVAHD  60
VASYCLRGPS SYNNLNFPAT LPVGVRTDMS PRSVQKAASD AGMAVDAQFA MNQTQQTRSS  120
SSSIDSRSRD ESKNVMNENN VNDGCFGVRE GRMVSSHQLE QREEALNISV EDYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-44ERF family protein