PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065019.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 404aa MW: 45787.7 Da PI: 6.4082

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.6	1.5e-50	27	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF Ptdeel+++yLkkk++g++ + +vi+ev+i+k+ePwdLp k+v +e+ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s XP_028065019.1 27 MFPGFRFTPTDEELISYYLKKKIQGSDKCV-DVIPEVEICKFEPWDLPaKSVIPSENEWFFFSSRGRKYPNGSQSKRATESGYWKATGKERNVKS 120 579**********************777.9************556666899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++l+g+k+tLvf+ grapkge+t+W+mhey + XP_028065019.1 121 -GSNLIGTKRTLVFHIGRAPKGERTEWIMHEYCM 153 .9****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEGETPPLLP PPPPPPPATM SIADSSMFPG FRFTPTDEEL ISYYLKKKIQ GSDKCVDVIP 60 EVEICKFEPW DLPAKSVIPS ENEWFFFSSR GRKYPNGSQS KRATESGYWK ATGKERNVKS 120 GSNLIGTKRT LVFHIGRAPK GERTEWIMHE YCMNGNPQDA MVVCRLRKNS EFRLNDNPRQ 180 GSSSRRHLST ENNNNNNNFS LSEIGAELSG IFEGASSHNS HSVEQQIDYG SESDQILPNE 240 CTQPGSSHQD CDDDEWYAEI IKDDIVDLDK SLLSPTPDDL LPTVPENSKD ERSQQEVQAN 300 LSHVLPFQGT AYRRIKLDRR IILSRRKQEK SQAEPREVEI SNDRSIKESW LPKCLLSLLS 360 DKRVNCCSVS IFLVILTLLL LCLSMLGVPC QVKRFTYASL SWRK

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEGETPPLLP PPPPPPPATM SIADSSMFPG FRFTPTDEEL ISYYLKKKIQ GSDKCVDVIP  60
EVEICKFEPW DLPAKSVIPS ENEWFFFSSR GRKYPNGSQS KRATESGYWK ATGKERNVKS  120
GSNLIGTKRT LVFHIGRAPK GERTEWIMHE YCMNGNPQDA MVVCRLRKNS EFRLNDNPRQ  180
GSSSRRHLST ENNNNNNNFS LSEIGAELSG IFEGASSHNS HSVEQQIDYG SESDQILPNE  240
CTQPGSSHQD CDDDEWYAEI IKDDIVDLDK SLLSPTPDDL LPTVPENSKD ERSQQEVQAN  300
LSHVLPFQGT AYRRIKLDRR IILSRRKQEK SQAEPREVEI SNDRSIKESW LPKCLLSLLS  360
DKRVNCCSVS IFLVILTLLL LCLSMLGVPC QVKRFTYASL SWRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	7e-87	NAC family protein