PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065467.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 252aa    MW: 29045.3 Da    PI: 9.831
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.6e-161057148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd+ll ++++++G g W+ ++ + g++R++k+c++rw++yl
   XP_028065467.1 10 KGAWTREEDLLLRNCIQKYGEGVWHQVPLRAGLNRCRKSCRLRWLNYL 57
                     79********************************************97 PP
2Myb_DNA-binding50.16.3e-1663108148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E +l+++++k+lG++ W++Ia +++ gRt++++k++w++++
   XP_028065467.1  63 RGNFTFDEVDLIIKLHKLLGNR-WSLIAGRLP-GRTPNDVKNFWNTHM 108
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MKGVRLGMRK GAWTREEDLL LRNCIQKYGE GVWHQVPLRA GLNRCRKSCR LRWLNYLKPN  60
IKRGNFTFDE VDLIIKLHKL LGNRWSLIAG RLPGRTPNDV KNFWNTHMHK KMIAQREEER  120
AKAHKKPMKY NNIFKPQPRT FSRNLLFPRG KSFNTENIQT EGNFPKAPPA SLLGDCGAPP  180
WLDGGVLDSM EMNSEISWSM YGSADQEPFQ VPWLPEELTT SMLAASDNSA EGGQSDWIDN  240
LTCNLDLWDF LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.19e-63MYB family protein