PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065479.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 709aa MW: 82613.9 Da PI: 7.4934

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.9	1.6e-18	49	135	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y++Y+k+ GF v+k++ k+ ++ge t C++ gk++ ++++ + r++t+tgCka l+ +++ dg w v +l+leHnHe++p XP_028065479.1 49 EYYSRYGKRNGFAVSKKYCKRG-DDGEKRYVTIACTRAGKAKIRTSN---IVKLRPQTKTGCKAGLNANLQGDGMWIVRSLRLEHNHEMSP 135 69*************99997.8999************9988...999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MDKEISSGSN EDCDEIDIET EIEDTKNVEV EIEDPKVGMT FKSIDEIYEY YSRYGKRNGF 60 AVSKKYCKRG DDGEKRYVTI ACTRAGKAKI RTSNIVKLRP QTKTGCKAGL NANLQGDGMW 120 IVRSLRLEHN HEMSPSKSRF FKQNRILEPH VQRRLELNDS AGIRMNKNFT SLVLEAGGHE 180 KLSYLEKDCR NHMDKVRRLK LEKGDATAMY DYFVKMQADN SEFFYVLDLD EEGRLLNVFW 240 ADARSRAAFK EFGDVVTFDT TYLVNKYDMP FAPFIGVNHH GQSTLLGCGL ISHENTETFT 300 WLFKSWLACM SGCPPNAIIT DQDKAMKNAI QIVFPNVRHR WCLWHILKKL PEKLRGYKEY 360 EAIKFGIQNA VYDSLTKKEF EENWNKLIEN YQLEGNEWLF GLFEDRHQWV PAFVKDIFWA 420 GMSTTQRSES MHAFFDGYIN SKTTLKQFVE QYENALAKKV ENENGEEFNS LNSYIPCITQ 480 YPFEKQFQKA YTIAKFKEFQ QEVVGQLHCN LSLYTQGPDF SVYEVSEDVP FGENLRLATF 540 IVYFDKENFD TNCSCRLFEF RGIVCRHQIV VLMKERVHEI PDKYILRRWN KNVKRCHSKV 600 IINYNNSSML PETRRYNKMF NVFNDVADLA TDCENRCDMV VEQLLELKGK LKEEVEIDYG 660 NNKSSFVSNH HNSTTHGDGV SKSKESRIIL DPVAIRQKGR PPCKRKQSM

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MDKEISSGSN EDCDEIDIET EIEDTKNVEV EIEDPKVGMT FKSIDEIYEY YSRYGKRNGF  60
AVSKKYCKRG DDGEKRYVTI ACTRAGKAKI RTSNIVKLRP QTKTGCKAGL NANLQGDGMW  120
IVRSLRLEHN HEMSPSKSRF FKQNRILEPH VQRRLELNDS AGIRMNKNFT SLVLEAGGHE  180
KLSYLEKDCR NHMDKVRRLK LEKGDATAMY DYFVKMQADN SEFFYVLDLD EEGRLLNVFW  240
ADARSRAAFK EFGDVVTFDT TYLVNKYDMP FAPFIGVNHH GQSTLLGCGL ISHENTETFT  300
WLFKSWLACM SGCPPNAIIT DQDKAMKNAI QIVFPNVRHR WCLWHILKKL PEKLRGYKEY  360
EAIKFGIQNA VYDSLTKKEF EENWNKLIEN YQLEGNEWLF GLFEDRHQWV PAFVKDIFWA  420
GMSTTQRSES MHAFFDGYIN SKTTLKQFVE QYENALAKKV ENENGEEFNS LNSYIPCITQ  480
YPFEKQFQKA YTIAKFKEFQ QEVVGQLHCN LSLYTQGPDF SVYEVSEDVP FGENLRLATF  540
IVYFDKENFD TNCSCRLFEF RGIVCRHQIV VLMKERVHEI PDKYILRRWN KNVKRCHSKV  600
IINYNNSSML PETRRYNKMF NVFNDVADLA TDCENRCDMV VEQLLELKGK LKEEVEIDYG  660
NNKSSFVSNH HNSTTHGDGV SKSKESRIIL DPVAIRQKGR PPCKRKQSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-132	FAR1 family protein