PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065519.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 572aa MW: 64628.8 Da PI: 6.4234

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.5	8.2e-25	199	252	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_028065519.1 199 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252 68*****************.9*****************************8 PP
2	Myb_DNA-binding	40	9.4e-13	201	251	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_028065519.1 201 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251 678***********************************************7 PP
3	Response_reg	79.4	1.3e-26	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_028065519.1 19 VLVVDDDLVWLRILEKMLKKCSY-EVTTCCLAREALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMRGVQHG 111 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_028065519.1 112 ACDYLLKPIRMKELRN 127 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MESGFCAART DAFPAGLRVL VVDDDLVWLR ILEKMLKKCS YEVTTCCLAR EALDLLRERK 60 DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMRGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEV RDIENLDCFE EIQMMRYGTD QSDDGHLFSG GDLTSGKKRK 180 DVENKGDDKD FSDASSAKKA RVVWTVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLGRLQKE NEVKAFLGGI KQSDLSSKDP VGSLGLQNSI DLQQNDVPSG 300 IYGVPGNKIR VQNVDPKNHE GDLKGIVSLP LIEPKKAPIH DIPDPPKTCS SRVELNHLFR 360 PLEPDIKYIP FDSTIPTQYS WSEVPEIQFK QEHKAHLQLK NGFNHLPLPP SISPRPFNKE 420 REKPARVEVK PSYADCKRQQ IRQAGPTRSA ANLLPVQSES HMTSFHTSEP IATTTLSLKN 480 HGLNQIFLND LESAQKNLIL GSCSGFGSLD EDGLACLLRG DCHTTMNVGI ENRESVSLAE 540 TPAYLFDAQR FDHEYPWESM EYPVIDQGLF IV

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MESGFCAART DAFPAGLRVL VVDDDLVWLR ILEKMLKKCS YEVTTCCLAR EALDLLRERK  60
DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMRGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEV RDIENLDCFE EIQMMRYGTD QSDDGHLFSG GDLTSGKKRK  180
DVENKGDDKD FSDASSAKKA RVVWTVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLGRLQKE NEVKAFLGGI KQSDLSSKDP VGSLGLQNSI DLQQNDVPSG  300
IYGVPGNKIR VQNVDPKNHE GDLKGIVSLP LIEPKKAPIH DIPDPPKTCS SRVELNHLFR  360
PLEPDIKYIP FDSTIPTQYS WSEVPEIQFK QEHKAHLQLK NGFNHLPLPP SISPRPFNKE  420
REKPARVEVK PSYADCKRQQ IRQAGPTRSA ANLLPVQSES HMTSFHTSEP IATTTLSLKN  480
HGLNQIFLND LESAQKNLIL GSCSGFGSLD EDGLACLLRG DCHTTMNVGI ENRESVSLAE  540
TPAYLFDAQR FDHEYPWESM EYPVIDQGLF IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-106	ARR-B family protein