PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065535.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 293aa    MW: 32536.6 Da    PI: 7.7391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.8e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd+ lvd+++ +G +tW++ ++  g+ R++k+c++rw +yl
   XP_028065535.1 14 RGAWTPEEDKVLVDYITTHGHPTWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding56.75.4e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eE+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ 
   XP_028065535.1  67 RGPFTPEEENRIIQLHGMLGNK-WAAIASHLP-GRTDNEVKNFWNSN 111
                      89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGRAPCCDKE AVKRGAWTPE EDKVLVDYIT THGHPTWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIIRGPF TPEEENRIIQ LHGMLGNKWA AIASHLPGRT DNEVKNFWNS NLKKRFFCIS  120
GLNLQASKPP SASISINTKP EPLSTRHMAQ WESARVEAEA RLSMNSLLSP SQTVKTDSDY  180
FLRLWNSEVG ESFRSLNGRR ESQSPISQTS SSTKVGSGSG VTMQAGPSRT SSPIEQKCIC  240
ANDMMGGSEC SNSYELDDSS NSAMNLLLDF PSGDDDMGFL QGQPDDVSIF FRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.12e-99MYB family protein